RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-213ENST00000556907 TNFRSF13BO14836 293 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-213ENST00000556907 CD5LO43866 347 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 FOXH1O75593 365 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 ZNF205O95201 554 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 IGHV4-31P0DP07 118 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 RPS2P15880 293 aaKnown RBP13.69□□□□□ -0.22
PCNX4-213ENST00000556907 PRKACAP17612 351 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 EGR1P18146 543 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 CD80P33681 288 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 MADCAM1Q13477 382 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 PIGYQ3MUY2 71 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 FIP1L1Q6UN15 594 aaKnown RBP13.69□□□□□ -0.22
PCNX4-213ENST00000556907 ACP7Q6ZNF0 438 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 SLC36A1Q7Z2H8 476 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 MAPK1IP1LQ8NDC0 245 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 DEFB108BQ8NET1 73 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 OR8B3Q8NGG8 313 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 SMIM4Q8WVI0 70 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 OR8B2Q96RD0 313 aa13.69□□□□□ -0.22
PCNX4-213ENST00000556907 SEBOXQ9HB31 216 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-213ENST00000556907 ABCA1O95477 2261 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 TRAV18A0A075B6X5 111 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 OR2AT4A6NND4 320 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 MFNGO00587 321 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 GPR37O15354 613 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 SOCS1O15524 211 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 GSTZ1O43708 216 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-213ENST00000556907 NXPH2O95156 264 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 HLA-DQB1P01920 261 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 GSTP1P09211 210 aaKnown RBP13.68□□□□□ -0.22
PCNX4-213ENST00000556907 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
PCNX4-213ENST00000556907 ARL6IP1Q15041 203 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 ESCO2Q56NI9 601 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 PYDC2Q56P42 97 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 STUMQ69YW2 141 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 BATF2Q8N1L9 274 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 MED30Q96HR3 178 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 ABHD1Q96SE0 405 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 IFT22Q9H7X7 185 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 RCC2Q9P258 522 aaKnown RBP13.68□□□□□ -0.22
PCNX4-213ENST00000556907 IL36RNQ9UBH0 155 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 HSF4Q9ULV5 492 aa13.68□□□□□ -0.22
PCNX4-213ENST00000556907 POLR3KQ9Y2Y1 108 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-213ENST00000556907 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 PPIAL4CA0A0B4J2A2 164 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 NKX6-3A6NJ46 265 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 A8MXK9 166 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 GABARAPH6UMI1 98 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 GEMIN2O14893 280 aaKnown RBP13.67□□□□□ -0.22
PCNX4-213ENST00000556907 UPK1BO75841 260 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 KNG1P01042 644 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 GYPAP02724 150 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 GABRR1P24046 479 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 CHATP28329 748 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 IL2RGP31785 369 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 DCTN2Q13561 401 aaKnown RBP13.67□□□□□ -0.22
PCNX4-213ENST00000556907 ZNF146Q15072 292 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 TAF9Q16594 264 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 SIGIRRQ6IA17 410 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 CLEC9AQ6UXN8 241 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 SNX29P2Q8IUI4 249 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 C19orf18Q8NEA5 215 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 ANGPTL6Q8NI99 470 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 TRIM63Q969Q1 353 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
PCNX4-213ENST00000556907 RAB3CQ96E17 227 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 WDR13Q9H1Z4 485 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 GLS2Q9UI32 602 aa13.67□□□□□ -0.22
PCNX4-213ENST00000556907 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.67□□□□□ -0.225e-11■■■■■ 31.5
PCNX4-213ENST00000556907 TRAV20A0A0B4J274 112 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 H3BUI4 141 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 SULT1C2O00338 296 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 ADAM20O43506 726 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 PDCD6O75340 191 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 CA11O75493 328 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 MSMBP08118 114 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 MELTFP08582 738 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 PSG2P11465 335 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 GATA3P23771 443 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 BLVRBP30043 206 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-213ENST00000556907 DVL1P1P54792 670 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-213ENST00000556907 TMEM50BP56557 158 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 GNB2P62879 340 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 PNLIPRP3Q17RR3 467 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 CD276Q5ZPR3 534 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 ZNF788Q6ZQV5 615 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 Q6ZTK2 550 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 Q8N402 240 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 ST8SIA4Q92187 359 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 ARHGAP5-AS1Q96IT6 56 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 SSBP3Q9BWW4 388 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-213ENST00000556907 PECRQ9BY49 303 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 SCPEP1Q9HB40 452 aa13.66□□□□□ -0.22
PCNX4-213ENST00000556907 SPACA1Q9HBV2 294 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms