RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SLC25A38Q96DW6 304 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 TXNIPQ9H3M7 391 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 NLKQ9UBE8 527 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 B9D1Q9UPM9 204 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 RTTNQ86VV8 2226 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CACNA1GO43497 2377 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 IGKV1D-43A0A0B4J1Z2 117 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SLC25A12O75746 678 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR2J3O76001 311 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MT-ND4P03905 459 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MMP7P09237 267 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 FGF5P12034 268 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CSRP1P21291 193 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SLC6A1P30531 599 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 TIMP3P35625 211 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CFHR2P36980 270 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 FOXF1Q12946 379 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 TAF13Q15543 124 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 NKAPLQ5M9Q1 402 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 GGNBP1Q5YKI7 109 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF57Q68EA5 555 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 NHLRC1Q6VVB1 395 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 FCRLAQ7L513 359 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 GTPBP8Q8N3Z3 284 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 LGALS14Q8TCE9 139 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 APH1AQ96BI3 265 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MSI2Q96DH6 328 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MICU1Q9BPX6 476 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MARVELD1Q9BSK0 173 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ST6GALNAC5Q9BVH7 336 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR2J1Q9GZK6 312 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 LPAR5Q9H1C0 372 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 GTSF1LQ9H1H1 148 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 PLEKHA2Q9HB19 425 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RALYQ9UKM9 306 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 VDAC3Q9Y277 283 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 TRAV8-7A0A075B6U6 113 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 A0A1B0GVI7 797 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 IFITM5A6NNB3 132 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 K7EPK0 472 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 HIST1H2ABP04908 130 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CELA2AP08217 269 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF84P51523 738 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CLDN20P56880 219 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RPL23AP62750 156 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 STAC2Q6ZMT1 411 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 HIST3H2AQ7L7L0 130 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 FAM71E2Q8N5Q1 922 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR10AD1Q8NGE0 317 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR52E5Q8NH55 327 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR4S2Q8NH73 311 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ST8SIA1Q92185 356 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 NAT6Q93015 286 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 HIST1H2ACQ93077 130 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SLC35E1Q96K37 410 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SCNM1Q9BWG6 230 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ABRACLQ9P1F3 81 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RCC2Q9P258 522 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 IGLV3-32A0A0A0MS00 114 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF705FA8MVS1 300 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 PRR33A8MZF0 331 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CORTO00230 105 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SLC16A7O60669 478 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RAD51DO75771 328 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 KLF7O75840 302 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MPZL1O95297 269 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 RENP00797 406 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 IGHV2-5P01817 119 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 UMODP07911 640 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 UBBP0CG47 229 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF705DP0CH99 300 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF705BP0CI00 300 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 IL2RGP31785 369 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 BRS3P32247 399 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CDKN1AP38936 164 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 CLDN12P56749 244 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 TMPRSS3P57727 454 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 DGCR2P98153 550 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZXDAP98168 799 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 FMODQ06828 376 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 ZFP36L1Q07352 338 aaKnown RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SPOCK1Q08629 439 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 PCOLCEQ15113 449 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 PLPPR5Q32ZL2 321 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 LGALSLQ3ZCW2 172 aaPredicted RBP4.45□□□□□ -1.7
TMEM260-210ENST00000556422 Q499Y3 187 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 NHLRC3Q5JS37 347 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 WDR38Q5JTN6 314 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 MDGA2Q7Z553 956 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR52L2PQ8NGH6 319 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR1N2Q8NGR9 330 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 OR5AK2Q8NH90 309 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 PTH2Q96A98 100 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 FGGYQ96C11 551 aa4.45□□□□□ -1.7
TMEM260-210ENST00000556422 C4orf45Q96LM5 186 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms