RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 DUSP1P28562 367 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 GPR176Q14439 515 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 IL13RA2Q14627 380 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 NHLRC3Q5JS37 347 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 SYT6Q5T7P8 510 aaPredicted RBP13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 BRD3OSQ6XYD6 125 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 CHST4Q8NCG5 386 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 OR5D13Q8NGL4 314 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 MUL1Q969V5 352 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 ING4Q9UNL4 249 aa13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 MRPS28Q9Y2Q9 187 aaKnown RBP13.21□□□□□ -0.29
CCDC85C-204ENST00000555822 RYR3Q15413 4870 aa13.21□□□□□ -0.3
CCDC85C-204ENST00000555822 TRDV1A0A1B0GX56 115 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 CLDN34H7C241 214 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 OR2H2O95918 312 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 CSTBP04080 98 aaKnown RBP13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 GLT8D1Q68CQ7 371 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 Q6P435 159 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 CMTM4Q8IZR5 234 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 OR4D6Q8NGJ1 314 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 OR10K1Q8NGX5 313 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 PPP1R35Q8TAP8 253 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 GHRLQ9UBU3 117 aa13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 SOX21Q9Y651 276 aaPredicted RBP13.2□□□□□ -0.3
CCDC85C-204ENST00000555822 A0A087WXM4 84 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 CENPVL3A0A0U1RRI6 287 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 M0R1W7 72 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 PSPNO60542 156 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 HTR3BO95264 441 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 ZNF44P15621 663 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 CALRP27797 417 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 RPL31P62899 125 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 MIDNQ504T8 468 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 C1orf100Q5SVJ3 147 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 RUSC1-AS1Q66K80 236 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 AWAT2Q6E213 333 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 GLIPR1L1Q6UWM5 242 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 GDPD3Q7L5L3 318 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 LINC00596Q86U02 117 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 OSR2Q8N2R0 312 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 TAF15Q92804 592 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 LHX4Q969G2 390 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 ZDHHC16Q969W1 377 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 MRPS24Q96EL2 167 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 C1orf147Q96MC9 270 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
CCDC85C-204ENST00000555822 IGHV1-69DA0A0B4J2H0 117 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 A0A1W2PPH5 198 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 A0A1W2PQ09 198 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 SIRPB1O00241 398 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 MGST3O14880 152 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 DEGS1O15121 323 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 IGHV1-69P01742 117 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 CSN2P05814 226 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 RNASE1P07998 156 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 UBBP0CG47 229 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 GTF2F2P13984 249 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 SERPINA2P20848 420 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 GABRR1P24046 479 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 ERP29P30040 261 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 OR3A1P47881 315 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 RBM11P57052 281 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 SLC9A3R2Q15599 337 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 GRK1Q15835 563 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 NEDD8Q15843 81 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 DEFB112Q30KQ8 113 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 SLC22A6Q4U2R8 563 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 TREML4Q6UXN2 200 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 VMO1Q7Z5L0 202 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 FAM185AQ8N0U4 392 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 OR4S1Q8NGB4 309 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 SLC25A28Q96A46 364 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 ST3GAL6Q9Y274 331 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 NBEAL2Q6ZNJ1 2754 aa13.18□□□□□ -0.3
CCDC85C-204ENST00000555822 TRAV1-2A0A0B4J238 106 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 MDFIC2A0A1B0GVS7 189 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 TRIM64CA6NLI5 447 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 SLC33A1O00400 549 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 SLC22A1O15245 554 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 HKR1P10072 659 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 FGF9P31371 208 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 MEF2CQ06413 473 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 MPV17LQ2QL34 196 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 PIGYQ3MUY2 71 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 TMEM200BQ69YZ2 307 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 METAP1DQ6UB28 335 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 SHISA2Q6UWI4 295 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 Q8N7P7 452 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 OR6M1Q8NGM8 313 aa13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 NR1H4Q96RI1 486 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-204ENST00000555822 CHST6Q9GZX3 395 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms