RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 YPEL4Q96NS1 127 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 C20orf144Q9BQM9 153 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 TMED9Q9BVK6 235 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 TSGA10Q9BZW7 698 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 C6orf50Q9HD87 102 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 NRBP2Q9NSY0 501 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 DDIT4Q9NX09 232 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 MAT2BQ9NZL9 334 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 CYB5R1Q9UHQ9 305 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 KPTNQ9Y664 436 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 MED13Q9UHV7 2174 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 MIA3Q5JRA6 1907 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 ADAMTSL3P82987 1691 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 IGHV2OR16-5A0A0B4J2B6 119 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 KNCNA6PVL3 124 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 SLC37A4O43826 429 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 GZMBP10144 247 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 HTR2CP28335 458 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 COILP38432 576 aaPredicted RBP0.9□□□□□ -2.27
SCFD1-216ENST00000555550 HCCSP53701 268 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 DYNC1I2Q13409 638 aaKnown RBP0.9□□□□□ -2.27
SCFD1-216ENST00000555550 SPIN4Q56A73 249 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 ULK3Q6PHR2 472 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 FAM58AQ8N1B3 248 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 METTL26Q96S19 204 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 AICDAQ9GZX7 198 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 IQCGQ9H095 443 aaKnown RBP0.9□□□□□ -2.27
SCFD1-216ENST00000555550 RAB1BQ9H0U4 201 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 GAL3ST2Q9H3Q3 398 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 ASB7Q9H672 318 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 MRPL22Q9NWU5 206 aaKnown RBP0.9□□□□□ -2.27
SCFD1-216ENST00000555550 CLEC2DQ9UHP7 191 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 RBMX2Q9Y388 322 aaKnown RBP0.9□□□□□ -2.27
SCFD1-216ENST00000555550 OTOFQ9HC10 1997 aa0.9□□□□□ -2.27
SCFD1-216ENST00000555550 TRBV24-1A0A075B6N3 115 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 ANKRD20A5PA0PJZ0 165 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 SIGLEC16A6NMB1 481 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 H3BRN7 92 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 PLEKHA8P1O95397 391 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 ETHE1O95571 254 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 STAG3L2P0CL84 134 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 CGB3P0DN86 165 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 CGB7P0DN87 165 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 PMCHP20382 165 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 PSMB9P28065 219 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 MAGEA3P43357 314 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 BCAP31P51572 246 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 CEACAM16Q2WEN9 425 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 ATP6AP1LQ52LC2 224 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 ACTL10Q5JWF8 245 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 UBE2NLQ5JXB2 153 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 Q6ZT83 130 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 CDRT4Q8N9R6 151 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 FAM184AQ8NB25 1140 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 OR13C9Q8NGT0 318 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 NDNFQ8TB73 568 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 OR2M4Q96R27 311 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 B9D2Q9BPU9 175 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 PORCNQ9H237 461 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 MFSD1Q9H3U5 465 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 FAM206AQ9NX38 181 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 ADGRB3O60242 1522 aa0.89□□□□□ -2.27
SCFD1-216ENST00000555550 LOC389332A0A1B0GUA5 103 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 A0A1B0GXF2 115 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 A0A1W2PRF3 423 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 A0A1W2PRM7 423 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 IQCF5A8MTL0 148 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 C17orf98A8MV24 154 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 H0YC42 278 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 M0QX08 132 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 RFXANKO14593 260 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 CDIPTO14735 213 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 ALOX12BO75342 701 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 SC5DO75845 299 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 CST4P01036 141 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 GP1BAP07359 652 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 BGNP21810 368 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 BLVRBP30043 206 aaPredicted RBP0.88□□□□□ -2.27
SCFD1-216ENST00000555550 PSMC5P62195 406 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 RPL31P62899 125 aaKnown RBP0.88□□□□□ -2.27
SCFD1-216ENST00000555550 SLAMF1Q13291 335 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 ZNF404Q494X3 552 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 CLLU1OSQ5K130 101 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 CLEC6AQ6EIG7 209 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 Q6ZRU5 148 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 PID1Q7Z2X4 250 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 ASCC1Q8N9N2 400 aaKnown RBP0.88□□□□□ -2.27
SCFD1-216ENST00000555550 OR51A7Q8NH64 312 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 LGALS14Q8TCE9 139 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 ZFAND1Q8TCF1 268 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 PIH1D2Q8WWB5 315 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 C22orf15Q8WYQ4 148 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 DNAJC30Q96LL9 226 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 SYT4Q9H2B2 425 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 CLSTN2Q9H4D0 955 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 TAS2R9Q9NYW1 312 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 TMEM131Q92545 1883 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 COL6A3P12111 3177 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 COL4A1P02462 1669 aa0.88□□□□□ -2.27
SCFD1-216ENST00000555550 ADAMTS7Q9UKP4 1686 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms