RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 FUOMA2VDF0 154 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 METTL21EPA6NDL7 271 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 FCN3O75636 299 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 TGFAP01135 160 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 CSN2P05814 226 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 GLAP06280 429 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 SNRPBP14678 240 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 GATA3P23771 443 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 SOX6P35712 828 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 OR3A1P47881 315 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 DVL1P1P54792 670 aaPredicted RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 DYNC1I2Q13409 638 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 RBM39Q14498 530 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 SPCS2Q15005 226 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 PAN3Q58A45 887 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 ATAD3CQ5T2N8 411 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 GDPD3Q7L5L3 318 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 BIVMQ86UB2 503 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 GLCCI1Q86VQ1 547 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 FAM89BQ8N5H3 189 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 SUMF2Q8NBJ7 301 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 OR56B1Q8NGI3 324 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 H1FXQ92522 213 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 AP3S1Q92572 193 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 TMEM186Q96B77 213 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 DMRTB1Q96MA1 342 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 NEDD4LQ96PU5 975 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 DCTN5Q9BTE1 182 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 DPCDQ9BVM2 203 aaPredicted RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 RBM38Q9H0Z9 239 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 RCC2Q9P258 522 aaKnown RBP11.84□□□□□ -0.51
CHD8-208ENST00000555301 MCRIP1C9JLW8 97 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 ENSAO43768 121 aaKnown RBP11.83□□□□□ -0.52
CHD8-208ENST00000555301 CD5LO43866 347 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 PDCD6O75340 191 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 PAHP00439 452 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 LIPFP07098 398 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
CHD8-208ENST00000555301 ZNF182P17025 639 aaPredicted RBP11.83□□□□□ -0.52
CHD8-208ENST00000555301 FUT3P21217 361 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
CHD8-208ENST00000555301 BTNL3Q6UXE8 466 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 FGFRL1Q8N441 504 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 OR4S1Q8NGB4 309 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 LGALS14Q8TCE9 139 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 RAB40AQ8WXH6 277 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 ACOT12Q8WYK0 555 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 BARHL1Q9BZE3 327 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 PPA2Q9H2U2 334 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 HIF1ANQ9NWT6 349 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 RPUSD1Q9UJJ7 312 aaKnown RBP11.83□□□□□ -0.52
CHD8-208ENST00000555301 SPATA2Q9UM82 520 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.52
CHD8-208ENST00000555301 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 A0A0G2JMP0 313 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 A0A0X1KG70 313 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 KIR2DS1A0A191URI9 304 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 C22orf46C9J442 243 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 HSPB6O14558 160 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 SCGNO76038 276 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 BLVRBP30043 206 aaPredicted RBP11.82□□□□□ -0.52
CHD8-208ENST00000555301 VEGFCP49767 419 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 EFNB2P52799 333 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 EDDM3BP56851 147 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 RPL31P62899 125 aaKnown RBP11.82□□□□□ -0.52
CHD8-208ENST00000555301 PAX2Q02962 417 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 EDDM3AQ14507 147 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 DCAF12L2Q5VW00 463 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 RAB12Q6IQ22 244 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 OR4M2Q8NGB6 313 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 C8orf46Q8TAG6 207 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 NUDT16L1Q9BRJ7 211 aaKnown RBP11.82□□□□□ -0.52
CHD8-208ENST00000555301 NICN1Q9BSH3 213 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 ZNF581Q9P0T4 197 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 LPAR3Q9UBY5 353 aa11.82□□□□□ -0.52
CHD8-208ENST00000555301 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 A0A0A6YYD4 124 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 A0A1W2PPH5 198 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 DPPA5A6NC42 116 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 CA11O75493 328 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 PPIAL4GP0DN37 164 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 CHATP28329 748 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 P2RX3P56373 397 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 PAX5Q02548 391 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 MEF2CQ06413 473 aaPredicted RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 KRTAP1-1Q07627 177 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 PLA2G7Q13093 441 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 ATXN7L3Q14CW9 347 aaPredicted RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 KRBOX4Q5JUW0 171 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 NKAPLQ5M9Q1 402 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 SIGIRRQ6IA17 410 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 MZT2AQ6P582 158 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 METAP1DQ6UB28 335 aaPredicted RBP11.81□□□□□ -0.52
CHD8-208ENST00000555301 BPIFB2Q8N4F0 458 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 LY6G5BQ8NDX9 201 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 OR4M1Q8NGD0 313 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 OR5H6Q8NGV6 325 aa11.81□□□□□ -0.52
CHD8-208ENST00000555301 DYNC2LI1Q8TCX1 351 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms