RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 NGFP01138 241 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 SCTP09683 121 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 ITGA3P26006 1051 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 F2RL1P55085 397 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 DAZAP2Q15038 168 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 GALNT14Q96FL9 552 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 KIRREL1Q96J84 757 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 C18orf12Q96KH6 178 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 FGF23Q9GZV9 251 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 FOXJ2Q9P0K8 574 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 NDRG3Q9UGV2 375 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 NKX2-6A6NCS4 301 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 B4E171 279 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 HSD17B6O14756 317 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 TSPAN7P41732 249 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 CAMLGP49069 296 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 OR2M7Q8NG81 312 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 OR10Z1Q8NGY1 313 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 C20orf24Q9BUV8 137 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 C1QTNF5Q9BXJ0 243 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 UBE2J1Q9Y385 318 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 PRELID3BQ9Y3B1 194 aa13.5□□□□□ -0.25
ARHGEF40-203ENST00000554514 C3orf85A0A1B0GTC6 90 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF732B4DXR9 585 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 ST8SIA3O43173 380 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 ABHD17BQ5VST6 288 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 DHRS7BQ6IAN0 325 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 EIF5A2Q9GZV4 153 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 PARP11Q9NR21 331 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF391Q9UJN7 358 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 BORCS7-ASMTA0A0B4J1R7 106 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 H7C1Q1 480 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 GAPDHP04406 335 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 CCDC71LQ8N9Z2 235 aa13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 FAM212BQ9NTI7 297 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-203ENST00000554514 FAM24AA6NFZ4 105 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 GPR137BO60478 399 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 NEURL1O76050 574 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 PLGLB1Q02325 96 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF565Q8N9K5 539 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 RXFP4Q8TDU9 374 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 HPSE2Q8WWQ2 592 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 C12orf49Q9H741 205 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZFP57Q9NU63 452 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 MED13Q9UHV7 2174 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 MPPED1O15442 326 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 TMEM211Q6ICI0 200 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 DPPA2Q7Z7J5 298 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 LURAP1LQ8IV03 231 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF695Q8IW36 515 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 UBAC2Q8NBM4 344 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 SPOCK3Q9BQ16 436 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 IL36GQ9NZH8 169 aa13.48□□□□□ -0.25
ARHGEF40-203ENST00000554514 HS3ST1O14792 307 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 SYNGR1O43759 233 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 SYNGR4O95473 234 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 GLAP06280 429 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 GNRHRP30968 328 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 LHX2P50458 406 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 GNMTQ14749 295 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 OR1C1Q15619 314 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 PEAR1Q5VY43 1037 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 PRDM14Q9GZV8 571 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF552Q9H707 407 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF703Q9H7S9 590 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 IGHV3-64DA0A0J9YX35 117 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 C9orf172C9J069 976 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 SSSCA1O60232 199 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 CD5P06127 495 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 DVL1P1P54792 670 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 PEA15Q15121 130 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZNF818PQ6ZRF7 136 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 ZDHHC23Q8IYP9 409 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 GAPTQ8N292 157 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 RSRP1Q9BUV0 290 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 MTCH1Q9NZJ7 389 aa13.47□□□□□ -0.25
ARHGEF40-203ENST00000554514 IGKV1D-13A0A0B4J2D9 117 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 LILRA1O75019 489 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 CRYBA1P05813 215 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 IGKV1-13P0DP09 117 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 RAB1AP62820 205 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 SPATA46Q5T0L3 261 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 C17orf78Q8N4C9 275 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 DMBX1Q8NFW5 382 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 RDH5Q92781 318 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 FAM173AQ9BQD7 235 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 STRADBQ9C0K7 418 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 RPS10P5Q9NQ39 176 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 TK1P04183 234 aa13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 SNRNP70P08621 437 aaKnown RBP13.46□□□□□ -0.25
ARHGEF40-203ENST00000554514 CLDN18P56856 261 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms