RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 LHX4Q969G2 390 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 SLC25A28Q96A46 364 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 C1orf147Q96MC9 270 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-211ENST00000554310 COMMD4Q9H0A8 199 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 NOX4Q9NPH5 578 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 ADAM30Q9UKF2 790 aa10.75□□□□□ -0.69
SHMT2-211ENST00000554310 IGKV1-9A0A0C4DH69 117 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 MDFIC2A0A1B0GVS7 189 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 TMEM89A2RUT3 159 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 ZFPL1O95159 310 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 PTTG1O95997 202 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 CYB5AP00167 134 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 ATF1P18846 271 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 AZGP1P25311 298 aaKnown RBP10.74□□□□□ -0.69
SHMT2-211ENST00000554310 PRDX2P32119 198 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 RPS11P62280 158 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHMT2-211ENST00000554310 GUCA2AQ02747 115 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 SLC9A3R2Q15599 337 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF79Q15937 498 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 DEFB112Q30KQ8 113 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 C12orf54Q6X4T0 127 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 SLC25A26Q70HW3 274 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 OR51A4Q8NGJ6 313 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 OR5AK2Q8NH90 309 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 SETD6Q8TBK2 473 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 GCDHQ92947 438 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-211ENST00000554310 ZDHHC16Q969W1 377 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 SLAMF9Q96A28 289 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 FGGYQ96C11 551 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 SRRQ9GZT4 340 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 FAM234AQ9H0X4 552 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 METTL8Q9H825 291 aaKnown RBP10.74□□□□□ -0.69
SHMT2-211ENST00000554310 UNKLQ9H9P5 680 aaKnown RBP10.74□□□□□ -0.69
SHMT2-211ENST00000554310 ELL3Q9HB65 397 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-211ENST00000554310 NEK6Q9HC98 313 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 MTCH1Q9NZJ7 389 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 OR14J1Q9UGF5 321 aa10.74□□□□□ -0.69
SHMT2-211ENST00000554310 A0A1W2PPH5 198 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 FUOMA2VDF0 154 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 SMIM30A4D0T7 59 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 TMEM127O75204 238 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 UCHL1P09936 223 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 POU3F4P49335 361 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 CEBPDP49716 269 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-211ENST00000554310 BCAP31P51572 246 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 MTCP1P56278 107 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 NCR3LG1Q68D85 454 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
SHMT2-211ENST00000554310 FAM131AQ6UXB0 335 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 MKXQ8IYA7 352 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 FAM185AQ8N0U4 392 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 Q8N7P7 452 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 OR13C9Q8NGT0 318 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 DIRAS2Q96HU8 199 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 DUX5Q96PT3 197 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
SHMT2-211ENST00000554310 ZCCHC4Q9H5U6 513 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF281Q9Y2X9 895 aa10.73□□□□□ -0.69
SHMT2-211ENST00000554310 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-211ENST00000554310 A0A0G2JK05 382 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 FABP12A6NFH5 140 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 HOXA3O43365 443 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-211ENST00000554310 ALX3O95076 343 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 TK1P04183 234 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 CHRM2P08172 466 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 RAB3BP20337 219 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 PSMD7P51665 324 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 SFXN4Q6P4A7 337 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 Q6YL49 198 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 LDLRAD3Q86YD5 345 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 BATF2Q8N1L9 274 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 POC5Q8NA72 575 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 TSEN15Q8WW01 171 aaKnown RBP10.72□□□□□ -0.69
SHMT2-211ENST00000554310 EMG1Q92979 244 aaKnown RBP10.72□□□□□ -0.69
SHMT2-211ENST00000554310 C19orf12Q9NSK7 152 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 DHDHQ9UQ10 334 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 POMT1Q9Y6A1 747 aa10.72□□□□□ -0.69
SHMT2-211ENST00000554310 F8VVB4 439 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 F8VWA3 439 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 RNASEK-C17orf49H0YIS7 233 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 K7N7A8 449 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 HAX1O00165 279 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 SULT1B1O43704 296 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 HPGDSO60760 199 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF737O75373 536 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 MELTFP08582 738 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 HKR1P10072 659 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 RPL31P62899 125 aaKnown RBP10.71□□□□□ -0.69
SHMT2-211ENST00000554310 COL10A1Q03692 680 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 HSD17B12Q53GQ0 312 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 SPIN3Q5JUX0 258 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 IDNKQ5T6J7 187 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms