RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 OR13C9Q8NGT0 318 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 Q8TCH9 128 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 ORAI1Q96D31 301 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 NKX3-1Q99801 234 aaPredicted RBP13.65□□□□□ -0.22
NEK9-204ENST00000554258 SSX3Q99909 188 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 DCTN5Q9BTE1 182 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 FAM234AQ9H0X4 552 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 TAS2R4Q9NYW5 299 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 SLC7A11Q9UPY5 501 aa13.65□□□□□ -0.22
NEK9-204ENST00000554258 A0A1W2PPK0 400 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 MEIOCA2RUB1 952 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 ZNF732B4DXR9 585 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 IRF2P14316 349 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 RAB3AP20336 220 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 AZGP1P25311 298 aaKnown RBP13.64□□□□□ -0.23
NEK9-204ENST00000554258 METAP1DQ6UB28 335 aaPredicted RBP13.64□□□□□ -0.23
NEK9-204ENST00000554258 LYPD6Q86Y78 171 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 OR51A2Q8NGJ7 313 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 WIPF2Q8TF74 440 aaPredicted RBP13.64□□□□□ -0.23
NEK9-204ENST00000554258 RCHY1Q96PM5 261 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 OR51E2Q9H255 320 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 SCOCQ9UIL1 159 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 KPTNQ9Y664 436 aa13.64□□□□□ -0.23
NEK9-204ENST00000554258 IGKV1-27A0A075B6S5 117 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 ARL6IP5O75915 188 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 ACAA1P09110 424 aaPredicted RBP13.63□□□□□ -0.23
NEK9-204ENST00000554258 SRMP19623 302 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 GADD45AP24522 165 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 MPZP25189 248 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 SAA4P35542 130 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 GPM6AP51674 278 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 PRB3Q04118 309 aaPredicted RBP13.63□□□□□ -0.23
NEK9-204ENST00000554258 MPPED2Q15777 294 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 HSD17B12Q53GQ0 312 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 PRAMEF6Q5VXH4 476 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 LRRTM1Q86UE6 522 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 C8orf46Q8TAG6 207 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 ZNF702PQ9H963 129 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 NEK6Q9HC98 313 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 SMURF1Q9HCE7 757 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 TMEM138Q9NPI0 162 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 SIRT7Q9NRC8 400 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 TXNL4BQ9NX01 149 aaKnown RBP13.63□□□□□ -0.23
NEK9-204ENST00000554258 CKLFQ9UBR5 152 aa13.63□□□□□ -0.23
NEK9-204ENST00000554258 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
NEK9-204ENST00000554258 PLECQ15149 4684 aaKnown RBP13.63□□□□□ -0.23
NEK9-204ENST00000554258 TRAV1-2A0A0B4J238 106 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 MEGF11A6BM72 1044 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 RBP2P50120 134 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 ATP1B3P54709 279 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 TCTEX1D4Q5JR98 221 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 LHFPL2Q6ZUX7 228 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 BTN2A1Q7KYR7 527 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 ZNF573Q86YE8 665 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 BEND2Q8NDZ0 799 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 BORCS8Q96FH0 119 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 PKIBQ9C010 78 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 SNTG1Q9NSN8 517 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 ONECUT1Q9UBC0 465 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 DNAJB11Q9UBS4 358 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 SSR3Q9UNL2 185 aa13.62□□□□□ -0.23
NEK9-204ENST00000554258 LSM4Q9Y4Z0 139 aaKnown RBP13.62□□□□□ -0.23
NEK9-204ENST00000554258 ADAM20O43506 726 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 NOS1APO75052 506 aaPredicted RBP13.61□□□□□ -0.23
NEK9-204ENST00000554258 LHBP01229 141 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 GRPP07492 148 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 BDKRB2P30411 391 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 PPP3R1P63098 170 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 DGCR2P98153 550 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 KCNJ8Q15842 424 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 TIMM50Q3ZCQ8 353 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 ANKRD13BQ86YJ7 626 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 PNKDQ8N490 385 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 OR52N4Q8NGI2 321 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 OR10Z1Q8NGY1 313 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 TRMT10AQ8TBZ6 339 aaKnown RBP13.61□□□□□ -0.23
NEK9-204ENST00000554258 AQP3Q92482 292 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 RPL3LQ92901 407 aaKnown RBP13.61□□□□□ -0.23
NEK9-204ENST00000554258 FUNDC2Q9BWH2 189 aa13.61□□□□□ -0.23
NEK9-204ENST00000554258 FAM230AA0A1W2PPH8 454 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 SHISA3A0PJX4 238 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 J3QT63 122 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 CDIPTO14735 213 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 CHST1O43916 411 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 JTBO76095 146 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 ECDO95905 644 aaPredicted RBP13.6□□□□□ -0.23
NEK9-204ENST00000554258 MTCP1P56278 107 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 IL24Q13007 206 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 KLRD1Q13241 179 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 KISS1Q15726 138 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 C22orf42Q6IC83 251 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 WDR82Q6UXN9 313 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 ASCL4Q6XD76 172 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 GPR141Q7Z602 305 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 ANGPTL5Q86XS5 388 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 CHCHD6Q9BRQ6 235 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 UFSP2Q9NUQ7 469 aa13.6□□□□□ -0.23
NEK9-204ENST00000554258 GSTK1Q9Y2Q3 226 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms