RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	POU3F4	P49335	361 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	RBP2	P50120	134 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	DOC2B	Q14184	412 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	HNF4G	Q14541	408 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	DEFB136	Q30KP8	78 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	LCNL1	Q6ZST4	164 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	MEPCE	Q7L2J0	689 aa	Known RBP	13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	CATSPERD	Q86XM0	798 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	DNAAF1	Q8NEP3	725 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	ADGRL4	Q9HBW9	690 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	GSTK1	Q9Y2Q3	226 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	STAB2	Q8WWQ8	2551 aa		13.27	□□□□□ -0.29
CACNB3-222	ENST00000552465	EPPK1	P58107	5090 aa	Known RBP	13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465		A0A1W2PPI3	338 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	ZNF729	A6NN14	1252 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	PRKY	O43930	277 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	LYL1	P12980	280 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	NFYB	P25208	207 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	PNLIPRP3	Q17RR3	467 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	ARHGAP24	Q8N264	748 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	YIPF7	Q8N8F6	280 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	CCDC54	Q8NEL0	328 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	COQ2	Q96H96	371 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	RCHY1	Q96PM5	261 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	ADI1	Q9BV57	179 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	ZNF446	Q9NWS9	450 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	CLN6	Q9NWW5	311 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	ING3	Q9NXR8	418 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	SMAD5-AS1	Q9Y6J3	95 aa		13.26	□□□□□ -0.29
CACNB3-222	ENST00000552465	IGKV1-9	A0A0C4DH69	117 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465		J3QR06	171 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	CSN2	P05814	226 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	CDX1	P47902	265 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	CRISP1	P54107	249 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	MTCP1	P56278	107 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	PDZK1IP1	Q13113	114 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	DIAPH2-AS1	Q14236	149 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	KRBOX4	Q5JUW0	171 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	SSX6	Q7RTT6	188 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	SBSPON	Q8IVN8	264 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	ADGRG5	Q8IZF4	528 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	C10orf35	Q96D05	121 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	KIRREL1	Q96J84	757 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	HRASLS5	Q96KN8	279 aa		13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNB3-222	ENST00000552465	IGKV1-12	A0A0C4DH73	117 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	AP4M1	O00189	453 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	IGKV1D-33	P01593	117 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	IGKV1-33	P01594	117 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	IGKV1D-12	P01611	117 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	KRT8	P05787	483 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	CGB3	P0DN86	165 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	CGB7	P0DN87	165 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	MNAT1	P51948	309 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	SCN1B	Q07699	218 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	ZNF260	Q3ZCT1	412 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	HSP90B2P	Q58FF3	399 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	PP6455	Q8WZ26	134 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	LRGUK	Q96M69	825 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465	COMMD4	Q9H0A8	199 aa		13.24	□□□□□ -0.29
CACNB3-222	ENST00000552465		B2RBV5	119 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	IGHV3-7	P01780	117 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	ZNF44	P15621	663 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	ATF1	P18846	271 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	PRKACB	P22694	351 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	GPR12	P47775	334 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	RAB7A	P51149	207 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	FOXE3	Q13461	319 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	MADCAM1	Q13477	382 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	GPR50	Q13585	617 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	PTGES3	Q15185	160 aa	Known RBP	13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	AADACL4	Q5VUY2	407 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465		Q6P435	159 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	OR8H3	Q8N146	312 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	RNF152	Q8N8N0	203 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	LEAP2	Q969E1	77 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	ADAT3	Q96EY9	351 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	GON7	Q9BXV9	100 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	PPIL3	Q9H2H8	161 aa	Known RBP	13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	PALMD	Q9NP74	551 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	OR6C3	Q9NZP0	311 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	PSG11	Q9UQ72	335 aa		13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNB3-222	ENST00000552465	METTL15	A6NJ78	407 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	SLC33A1	O00400	549 aa	Predicted RBP	13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	CCRL2	O00421	344 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	KDM4B	O94953	1096 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	ELANE	P08246	267 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	EFNB1	P98172	346 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	EBI3	Q14213	229 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	NXNL2	Q5VZ03	156 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	LHFPL2	Q6ZUX7	228 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	RDH10	Q8IZV5	341 aa		13.22	□□□□□ -0.29
CACNB3-222	ENST00000552465	PRSS35	Q8N3Z0	413 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms