RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ZNF418Q8TF45 676 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-225ENST00000551845 LHX4Q969G2 390 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 TBX15Q96SF7 602 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 BARHL1Q9BZE3 327 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 CHST6Q9GZX3 395 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 SIRPDQ9H106 197 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 PPIL3Q9H2H8 161 aaKnown RBP8.74□□□□□ -1.01
PTCH1-225ENST00000551845 METTL8Q9H825 291 aaKnown RBP8.74□□□□□ -1.01
PTCH1-225ENST00000551845 C19orf12Q9NSK7 152 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 NDUFB11Q9NX14 153 aa8.74□□□□□ -1.01
PTCH1-225ENST00000551845 IGHV3OR16-10A0A075B7F0 116 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 A0A0A6YYJ9 748 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 TRAV40A0A0B4J280 105 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 CENPVL3A0A0U1RRI6 287 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 H3BUI4 141 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 SLC33A1O00400 549 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-225ENST00000551845 PDCD5O14737 125 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 TCF21O43680 179 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 UBBP0CG47 229 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 IGHV4-38-2P0DP08 117 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 CD37P11049 281 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 PRTN3P24158 256 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 CALRP27797 417 aaKnown RBP8.73□□□□□ -1.01
PTCH1-225ENST00000551845 HTR2CP28335 458 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 EDDM3AQ14507 147 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 NHLRC3Q5JS37 347 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 C1orf100Q5SVJ3 147 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 SYT6Q5T7P8 510 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-225ENST00000551845 VMO1Q7Z5L0 202 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 ZNF565Q8N9K5 539 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 TSPAN14Q8NG11 270 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 OR4D6Q8NGJ1 314 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 C22orf15Q8WYQ4 148 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 JMJD8Q96S16 334 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 SUCNR1Q9BXA5 334 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 CST11Q9H112 138 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 VCX3AQ9NNX9 186 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 ZNF69Q9UC07 566 aa8.73□□□□□ -1.01
PTCH1-225ENST00000551845 AK6Q9Y3D8 172 aaKnown RBP8.73□□□□□ -1.01
PTCH1-225ENST00000551845 TRAV1-2A0A0B4J238 106 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 GEMIN2O14893 280 aaKnown RBP8.72□□□□□ -1.01
PTCH1-225ENST00000551845 CRTAPO75718 401 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-225ENST00000551845 OR7C1O76099 320 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-225ENST00000551845 ZNF728P0DKX0 622 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 OR3A1P47881 315 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 KCNJ3P48549 501 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 AESQ08117 197 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 NEDD8Q15843 81 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 TAF9Q16594 264 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 MPV17LQ2QL34 196 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 PIGYQ3MUY2 71 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 PAN3Q58A45 887 aaKnown RBP8.72□□□□□ -1.01
PTCH1-225ENST00000551845 ATAD3CQ5T2N8 411 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 NCR3LG1Q68D85 454 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 CD200R1LQ6Q8B3 271 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 METAP1DQ6UB28 335 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-225ENST00000551845 USP43Q70EL4 1123 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 Q8N7P7 452 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 TPRX1Q8N7U7 411 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 SELENOIQ9C0D9 397 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 PPA2Q9H2U2 334 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 HEXA-AS1Q9H8Q6 139 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
PTCH1-225ENST00000551845 PLGRKTQ9HBL7 147 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 SIRT7Q9NRC8 400 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 ING3Q9NXR8 418 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 SSR3Q9UNL2 185 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 V9GY05 133 aa8.72□□□□□ -1.01
PTCH1-225ENST00000551845 TRGV10A0A0A0MS01 117 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 TRAV24A0A0B4J272 114 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 A0A1W2PP11 408 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 C17orf98A8MV24 154 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 MCRIP1C9JLW8 97 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 KCNAB3O43448 404 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 IGHV1-69P01742 117 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 CSN2P05814 226 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 MGMTP16455 207 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 CCL3L1P16619 93 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 MYL9P24844 172 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 FGF9P31371 208 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 P2RX3P56373 397 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 RBM11P57052 281 aaKnown RBP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 ERVFRD-1P60508 538 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 RBM39Q14498 530 aaKnown RBP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF273Q14593 569 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 KRBOX4Q5JUW0 171 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 BRD3OSQ6XYD6 125 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 C9orf139Q6ZV77 190 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 TRAPPC6BQ86SZ2 158 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 PDZD9Q8IXQ8 264 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 BCL6BQ8N143 479 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 C11orf42Q8N5U0 333 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 SUMF2Q8NBJ7 301 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 OR6M1Q8NGM8 313 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 TNFRSF14Q92956 283 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF714Q96N38 554 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms