RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SCAND1P57086 179 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 KRTAP1-1Q07627 177 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 KCNJ8Q15842 424 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 WDR25Q64LD2 544 aaPredicted RBP11.19□□□□□ -0.62
ERBB3-215ENST00000550828 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
ERBB3-215ENST00000550828 LINC00596Q86U02 117 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 CMTM4Q8IZR5 234 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 ZNF561Q8N587 486 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 SUMF2Q8NBJ7 301 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 TMEM185AQ8NFB2 350 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 DYRK2Q92630 601 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 PTX4Q96A99 478 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 COQ2Q96H96 371 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 C1orf159Q96HA4 380 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
ERBB3-215ENST00000550828 PCDHB16Q9NRJ7 776 aa11.19□□□□□ -0.62
ERBB3-215ENST00000550828 ANK3Q12955 4377 aaKnown RBP11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A10PA6NDY2 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A18PA6NE21 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A16PA6NEW6 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A20PA6NIJ5 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A8PA6NJQ4 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A22PA8MWA6 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A12PA8MX19 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A5PA8MXJ8 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 CTDSP2O14595 271 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 TMEM127O75204 238 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 PDCD6O75340 191 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 TK1P04183 234 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A15PP0C7V4 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A13PP0C7W8 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A14PP0C7W9 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 FAM90A24PP0C7X0 464 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 CPT2P23786 658 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 VEGFCP49767 419 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 PAX2Q02962 417 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 DYNC1I2Q13409 638 aaKnown RBP11.18□□□□□ -0.62
ERBB3-215ENST00000550828 OLFML2AQ68BL7 652 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 Q6ZPA2 131 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 TCF23Q7RTU1 214 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 SLC36A1Q7Z2H8 476 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 C6orf201Q7Z4U5 140 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 BPIFB2Q8N4F0 458 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 SAMD12Q8N8I0 201 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 DTX3Q8N9I9 347 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
ERBB3-215ENST00000550828 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 DACT3Q96B18 629 aaPredicted RBP11.18□□□□□ -0.62
ERBB3-215ENST00000550828 COX4I2Q96KJ9 171 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 SNX22Q96L94 193 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 OR8B2Q96RD0 313 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 SULT4A1Q9BR01 284 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 BATF3Q9NR55 127 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 COMMD3Q9UBI1 195 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 SLC25A10Q9UBX3 287 aaPredicted RBP11.18□□□□□ -0.62
ERBB3-215ENST00000550828 PCDHB10Q9UN67 800 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
ERBB3-215ENST00000550828 A8MXK9 166 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ATXN7L3Q14CW9 347 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-215ENST00000550828 TMEM249Q2WGJ8 235 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 PAN3Q58A45 887 aaKnown RBP11.17□□□□□ -0.62
ERBB3-215ENST00000550828 RAB12Q6IQ22 244 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 LAX1Q8IWV1 398 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 OR8H2Q8N162 312 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 TPRX1Q8N7U7 411 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 CHST4Q8NCG5 386 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ACOT12Q8WYK0 555 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ST8SIA4Q92187 359 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 RAB39BQ96DA2 213 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 MED30Q96HR3 178 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ARHGAP5-AS1Q96IT6 56 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 URM1Q9BTM9 101 aaKnown RBP11.17□□□□□ -0.62
ERBB3-215ENST00000550828 DPCDQ9BVM2 203 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ATG5Q9H1Y0 275 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ABCG5Q9H222 651 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 LPAR2Q9HBW0 351 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 C19orf12Q9NSK7 152 aa11.17□□□□□ -0.62
ERBB3-215ENST00000550828 ELF5Q9UKW6 265 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-215ENST00000550828 A0A075B6Q4 140 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 MEX3AA1L020 520 aaKnown RBP11.16□□□□□ -0.62
ERBB3-215ENST00000550828 MFNGO00587 321 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 SMAD7O15105 426 aaKnown RBP11.16□□□□□ -0.62
ERBB3-215ENST00000550828 NDUFB3O43676 98 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 ELK1P19419 428 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 FUT3P21217 361 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 SOX6P35712 828 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 LCN2P80188 198 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 EDDM3AQ14507 147 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 GRK1Q15835 563 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 UBE2NLQ5JXB2 153 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 NKAPLQ5M9Q1 402 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 ATAD3CQ5T2N8 411 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms