RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 IL22RA2Q969J5 263 aa8.5□□□□□ -1.05
RAB5B-206ENST00000549505 MICU1Q9BPX6 476 aa8.5□□□□□ -1.05
RAB5B-206ENST00000549505 MFFQ9GZY8 342 aa8.5□□□□□ -1.05
RAB5B-206ENST00000549505 SLC25A32Q9H2D1 315 aa8.5□□□□□ -1.05
RAB5B-206ENST00000549505 NAA60Q9H7X0 242 aa8.5□□□□□ -1.05
RAB5B-206ENST00000549505 MBNL3Q9NUK0 354 aaKnown RBP8.5□□□□□ -1.05
RAB5B-206ENST00000549505 OTOGLQ3ZCN5 2332 aa8.5□□□□□ -1.05
RAB5B-206ENST00000549505 TRAV24A0A0B4J272 114 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 OR5H1A6NKK0 313 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 LILRA1O75019 489 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 NDUFS6O75380 124 aaKnown RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 TOXO94900 526 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 CCL2P13500 99 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 GLRA1P23415 457 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 OPRM1P35372 400 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 TDGF1P3P51864 188 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 RBM39Q14498 530 aaKnown RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 C1orf185Q5T7R7 199 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 C9orf135Q5VTT2 229 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 RGS7BPQ6MZT1 257 aaPredicted RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF546Q86UE3 836 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 FAM90A1Q86YD7 464 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 FAM58AQ8N1B3 248 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 OR8G5Q8NG78 346 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 SLAMF9Q96A28 289 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 TMEM56Q96MV1 263 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 DPCDQ9BVM2 203 aaPredicted RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 ELL3Q9HB65 397 aaPredicted RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 CDH20Q9HBT6 801 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 PCDHB10Q9UN67 800 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 TMEM56-RWDD3S4R434 201 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 RAB19A4D1S5 217 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 CSN2P05814 226 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 SERPINF1P36955 418 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 SRPXP78539 464 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 TIMM23BQ5SRD1 257 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 C11orf53Q8IXP5 236 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 FAM57AQ8TBR7 257 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 MSI2Q96DH6 328 aaKnown RBP8.49□□□□□ -1.05
RAB5B-206ENST00000549505 REG4Q9BYZ8 158 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 DNTTIP1Q9H147 329 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 NCOR1P1Q9H4R4 102 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 PROCRQ9UNN8 238 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 SYNGR1O43759 233 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 PDGFAP04085 211 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 AKR1C4P17516 323 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 FAM209BQ5JX69 171 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 VWA1Q6PCB0 445 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 PCSK4Q6UW60 755 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF497Q6ZNH5 498 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 SGPP2Q8IWX5 399 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 PIGMQ9H3S5 423 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 RASL12Q9NYN1 266 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 COMMD9Q9P000 198 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 JKAMPQ9P055 326 aa8.49□□□□□ -1.05
RAB5B-206ENST00000549505 CELA3BP08861 270 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF728P0DKX0 622 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 SSTR2P30874 369 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 PSG7Q13046 419 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 FIP1L1Q6UN15 594 aaKnown RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF600Q6ZNG1 722 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 ASCL5Q7RTU5 278 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 SUMF2Q8NBJ7 301 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 CHMP1AQ9HD42 196 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 ZFP57Q9NU63 452 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 TMEM100Q9NV29 134 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF701Q9NV72 531 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 PURGQ9UJV8 347 aaKnown RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 SPEGQ15772 3267 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 SDCBPO00560 298 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 DEGS1O15121 323 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 ARPC5O15511 151 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 PET100P0DJ07 73 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 CD200P41217 278 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 FOXF2Q12947 444 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 SLC22A25Q6T423 547 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 BHLHA15Q7RTS1 189 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 OR10Z1Q8NGY1 313 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 SLC25A40Q8TBP6 338 aa8.48□□□□□ -1.05
RAB5B-206ENST00000549505 KLF14Q8TD94 323 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-206ENST00000549505 IGHV1-18A0A0C4DH31 117 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 H0YIZ8 118 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 IFNL4K9M1U5 179 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 SHOXO15266 292 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 NMBP08949 121 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 SLC25A6P12236 298 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 MZT1Q08AG7 82 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 HERPUD1Q15011 391 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 HMGN3Q15651 99 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CR1LQ2VPA4 569 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 DMRTC1Q5HYR2 192 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 LIAT1Q6ZQX7 453 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 H1FOOQ8IZA3 346 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CCDC71LQ8N9Z2 235 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 SCCPDHQ8NBX0 429 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms