RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TRAV20A0A0B4J274 112 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 C7orf77A4D0Y5 90 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 MAGEA5P43359 124 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 HIKESHIQ53FT3 197 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 FAM166AQ6J272 317 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
CACNB3-209ENST00000548860 DHRS11Q6UWP2 260 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 NINJ1Q92982 152 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 AURKAIP1Q9NWT8 199 aaPredicted RBP12.32□□□□□ -0.44
CACNB3-209ENST00000548860 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 ARGFXA6NJG6 315 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 SLC25A4P12235 298 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 FUT3P21217 361 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 RAC1P63000 192 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 ZP4Q12836 540 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 PRDX4Q13162 271 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 RHEBQ15382 184 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 ATP1A1-AS1Q5TC04 95 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 NMES1Q9C002 83 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
CACNB3-209ENST00000548860 HKR1P10072 659 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CHATP28329 748 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CALCRP30988 508 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 PCBD1P61457 104 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF816Q0VGE8 651 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 ENDOGQ14249 297 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 USF2Q15853 346 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 TFAP2EQ6VUC0 442 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 RBMS3Q6XE24 437 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 MARS2Q96GW9 593 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CDH20Q9HBT6 801 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 DEGS1O15121 323 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 IL2RGP31785 369 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CCL11P51671 97 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 SUPT4H1P63272 117 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 FAM131CQ96AQ9 280 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 MRPL13Q9BYD1 178 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 STRADBQ9C0K7 418 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 BOKQ9UMX3 212 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 FCGR3AP08637 254 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CTRB1P17538 263 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 GABRA2P47869 451 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 SUCLG1P53597 346 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 CTRB2Q6GPI1 263 aa12.31□□□□□ -0.44
CACNB3-209ENST00000548860 RPUSD4Q96CM3 377 aaKnown RBP12.31□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 CD8AP01732 235 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 OR10J5Q8NHC4 309 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 MUC3AQ02505 3323 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 CHST1O43916 411 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 PPYP01298 95 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 ADIRFQ15847 76 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 TRBV23-1A0A0A0MS06 115 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 SYNGR1O43759 233 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 PDCD6O75340 191 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 LYZL6O75951 148 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 TFF1P04155 84 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 S100PP25815 95 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 CLN3Q13286 438 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 MRGPRFQ96AM1 343 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 SPIN2AQ99865 258 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 SPIN2BQ9BPZ2 258 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 OPA3Q9H6K4 179 aa12.3□□□□□ -0.44
CACNB3-209ENST00000548860 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 OR2C3Q8N628 320 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 CCDC54Q8NEL0 328 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 IER2Q9BTL4 223 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 STARD10Q9Y365 291 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 FREM2Q5SZK8 3169 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 TMEM127O75204 238 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-209ENST00000548860 TGFBR3Q03167 851 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 RAB35Q15286 201 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 TREM2Q9NZC2 230 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 DYNLT3P51808 116 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 RAC3P60763 192 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 ZNF345Q14585 488 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 PCOLCEQ15113 449 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 C6orf15Q6UXA7 325 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-209ENST00000548860 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
CACNB3-209ENST00000548860 PHYHIPLQ96FC7 376 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 UCK1Q9HA47 277 aa12.29□□□□□ -0.44
CACNB3-209ENST00000548860 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms