RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 TCF23Q7RTU1 214 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 OR2W3Q7Z3T1 314 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 DYNC2LI1Q8TCX1 351 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 DYRK2Q92630 601 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 MRPS24Q96EL2 167 aaKnown RBP13.47□□□□□ -0.25
LIMS2-217ENST00000545738 RCC2Q9P258 522 aaKnown RBP13.47□□□□□ -0.25
LIMS2-217ENST00000545738 DEGS1O15121 323 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 SOCS1O15524 211 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 CD99P14209 185 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 TMEM50BP56557 158 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 FIP1L1Q6UN15 594 aaKnown RBP13.47□□□□□ -0.25
LIMS2-217ENST00000545738 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 OR8H2Q8N162 312 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 FAM89BQ8N5H3 189 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 OR4M1Q8NGD0 313 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 PLPPR1Q8TBJ4 325 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 COQ2Q96H96 371 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 MED30Q96HR3 178 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 BCL7BQ9BQE9 202 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 IFT22Q9H7X7 185 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 NDUFB3O43676 98 aa13.46□□□□□ -0.25
LIMS2-217ENST00000545738 MSMBP08118 114 aa13.46□□□□□ -0.25
LIMS2-217ENST00000545738 DYNC1I2Q13409 638 aaKnown RBP13.46□□□□□ -0.25
LIMS2-217ENST00000545738 ATXN7L3Q14CW9 347 aaPredicted RBP13.46□□□□□ -0.25
LIMS2-217ENST00000545738 SUMF2Q8NBJ7 301 aa13.46□□□□□ -0.25
LIMS2-217ENST00000545738 SNX22Q96L94 193 aa13.46□□□□□ -0.25
LIMS2-217ENST00000545738 GSX1Q9H4S2 264 aaPredicted RBP13.46□□□□□ -0.25
LIMS2-217ENST00000545738 C19orf12Q9NSK7 152 aa13.46□□□□□ -0.25
LIMS2-217ENST00000545738 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.25
LIMS2-217ENST00000545738 POLR3KQ9Y2Y1 108 aaPredicted RBP13.46□□□□□ -0.25
LIMS2-217ENST00000545738 CCDC160A6NGH7 325 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 B4DSR2 109 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 NDUFB7P17568 137 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 GRK1Q15835 563 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 MPV17LQ2QL34 196 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 LRRC10Q5BKY1 277 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 PLAC9Q5JTB6 97 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 LINC01356Q8N9X3 169 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 DCTN5Q9BTE1 182 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 ING3Q9NXR8 418 aa13.45□□□□□ -0.26
LIMS2-217ENST00000545738 RAB27BO00194 218 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 TGFAP01135 160 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 ZNF182P17025 639 aaPredicted RBP13.44□□□□□ -0.26
LIMS2-217ENST00000545738 CHATP28329 748 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 VEGFCP49767 419 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 AESQ08117 197 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 EDDM3AQ14507 147 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 ATAD3CQ5T2N8 411 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 OLFML2AQ68BL7 652 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 Q6ZPA2 131 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 C6orf201Q7Z4U5 140 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 LINC00596Q86U02 117 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 CHST4Q8NCG5 386 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 SULT4A1Q9BR01 284 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 DPCDQ9BVM2 203 aaPredicted RBP13.44□□□□□ -0.26
LIMS2-217ENST00000545738 FAM234AQ9H0X4 552 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 PCDHB16Q9NRJ7 776 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 RPUSD1Q9UJJ7 312 aaKnown RBP13.44□□□□□ -0.26
LIMS2-217ENST00000545738 RAB22AQ9UL26 194 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 KCNK7Q9Y2U2 307 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 LY6G6DO95868 133 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 CPT2P23786 658 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 GLIPR1P48060 266 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 NPY4RP50391 375 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 DLX1P56177 255 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 ERVFRD-1P60508 538 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 ZNF273Q14593 569 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 PAN3Q58A45 887 aaKnown RBP13.44□□□□□ -0.26
LIMS2-217ENST00000545738 RAB12Q6IQ22 244 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 LY6G5BQ8NDX9 201 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 H1FXQ92522 213 aaKnown RBP13.44□□□□□ -0.26
LIMS2-217ENST00000545738 HIF1ANQ9NWT6 349 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 ELF5Q9UKW6 265 aaPredicted RBP13.44□□□□□ -0.26
LIMS2-217ENST00000545738 SPATA2Q9UM82 520 aa13.44□□□□□ -0.26
LIMS2-217ENST00000545738 LOC105371242A0A075B767 164 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A10PA6NDY2 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A18PA6NE21 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A16PA6NEW6 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 A6NHS1 94 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A20PA6NIJ5 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A8PA6NJQ4 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A7PA6NKC0 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A22PA8MWA6 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A12PA8MX19 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A5PA8MXJ8 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A23PA8MXZ1 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FOXH1O75593 365 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 AVPP01185 164 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 CSN2P05814 226 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 HEXAP06865 529 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A15PP0C7V4 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A13PP0C7W8 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A14PP0C7W9 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 FAM90A24PP0C7X0 464 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 RAB6AP20340 208 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 GZMKP49863 264 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 RORCP51449 518 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 NKAPLQ5M9Q1 402 aa13.43□□□□□ -0.26
LIMS2-217ENST00000545738 RSBN1Q5VWQ0 802 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-217ENST00000545738 TMEM186Q96B77 213 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms