RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 A0A0A6YYJ9 748 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 TRAV1-2A0A0B4J238 106 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 SHISA3A0PJX4 238 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 C17orf98A8MV24 154 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 DEGS1O15121 323 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 RBP4P02753 201 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 CSTBP04080 98 aaKnown RBP15.67■□□□□ 0.1
DDX55-211ENST00000544429 GTF2F2P13984 249 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 ZNF44P15621 663 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 SERPINA2P20848 420 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 CALRP27797 417 aaKnown RBP15.67■□□□□ 0.1
DDX55-211ENST00000544429 GLT8D1Q68CQ7 371 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 AWAT2Q6E213 333 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 PPP1R35Q8TAP8 253 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 SLC25A28Q96A46 364 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 COQ2Q96H96 371 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 NR1H4Q96RI1 486 aaPredicted RBP15.67■□□□□ 0.1
DDX55-211ENST00000544429 S100A13Q99584 98 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 SLC6A7Q99884 636 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 PRDM13Q9H4Q3 707 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 PCDHB16Q9NRJ7 776 aa15.67■□□□□ 0.1
DDX55-211ENST00000544429 IGHV3OR16-10A0A075B7F0 116 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 IGHV1-69DA0A0B4J2H0 117 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 RNASEK-C17orf49H0YIS7 233 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 GEMIN2O14893 280 aaKnown RBP15.66■□□□□ 0.1
DDX55-211ENST00000544429 IGHV1-69P01742 117 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 CCL3L1P16619 93 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 FPR2P25090 351 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 FGF9P31371 208 aaPredicted RBP15.66■□□□□ 0.1
DDX55-211ENST00000544429 P2RX3P56373 397 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 QRFPP83859 136 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 MPV17LQ2QL34 196 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 GPR157Q5UAW9 335 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 HCP5Q6MZN7 132 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 TMEM104Q8NE00 496 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 C22orf15Q8WYQ4 148 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 ZNF48Q96MX3 618 aaPredicted RBP15.66■□□□□ 0.1
DDX55-211ENST00000544429 SLITRK2Q9H156 845 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 PPA2Q9H2U2 334 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 NCOR1P1Q9H4R4 102 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 RCC2Q9P258 522 aaKnown RBP15.66■□□□□ 0.1
DDX55-211ENST00000544429 LINC00312Q9Y6C7 94 aa15.66■□□□□ 0.1
DDX55-211ENST00000544429 A0A1W2PPH5 198 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 UBBP0CG47 229 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 CFPP27918 469 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 DLX1P56177 255 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 EDDM3BP56851 147 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 HILS1P60008 231 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 EDDM3AQ14507 147 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 BRD3OSQ6XYD6 125 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 PIP4P2Q8N4L2 257 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 TPRX1Q8N7U7 411 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 TSPAN14Q8NG11 270 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 OR6M1Q8NGM8 313 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 CORO2AQ92828 525 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 LHX4Q969G2 390 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 Q96M66 194 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 SIRT7Q9NRC8 400 aa15.65■□□□□ 0.1
DDX55-211ENST00000544429 SOX21Q9Y651 276 aaPredicted RBP15.65■□□□□ 0.1
DDX55-211ENST00000544429 A0A087WXM4 84 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 hADV38S2A0JD32 116 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A10PA6NDY2 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A18PA6NE21 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A16PA6NEW6 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A20PA6NIJ5 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A8PA6NJQ4 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A7PA6NKC0 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A22PA8MWA6 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A12PA8MX19 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A5PA8MXJ8 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A23PA8MXZ1 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 SLC17A2O00624 439 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 TCF21O43680 179 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A15PP0C7V4 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A13PP0C7W8 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A14PP0C7W9 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 FAM90A24PP0C7X0 464 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 ZNF728P0DKX0 622 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 MGMTP16455 207 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 HTR2CP28335 458 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 GLIPR1P48060 266 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 KCNJ3P48549 501 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 SCN1BQ07699 218 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 AESQ08117 197 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 BLMHQ13867 455 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 NEDD8Q15843 81 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 NCR3LG1Q68D85 454 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 BPIFB2Q8N4F0 458 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 SUCNR1Q9BXA5 334 aa15.64■□□□□ 0.09
DDX55-211ENST00000544429 MS4A7Q9GZW8 240 aaPredicted RBP15.64■□□□□ 0.09
DDX55-211ENST00000544429 UBE2J1Q9Y385 318 aaPredicted RBP15.64■□□□□ 0.09
DDX55-211ENST00000544429 AK6Q9Y3D8 172 aaKnown RBP15.64■□□□□ 0.09
DDX55-211ENST00000544429 OR7C1O76099 320 aaPredicted RBP15.63■□□□□ 0.09
DDX55-211ENST00000544429 VSIG8P0DPA2 414 aa15.63■□□□□ 0.09
DDX55-211ENST00000544429 UBE2E1P51965 193 aa15.63■□□□□ 0.09
DDX55-211ENST00000544429 ERVFRD-1P60508 538 aa15.63■□□□□ 0.09
DDX55-211ENST00000544429 GUCA2AQ02747 115 aa15.63■□□□□ 0.09
DDX55-211ENST00000544429 TAF9Q16594 264 aa15.63■□□□□ 0.09
DDX55-211ENST00000544429 PAN3Q58A45 887 aaKnown RBP15.63■□□□□ 0.09
DDX55-211ENST00000544429 RUSC1-AS1Q66K80 236 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms