RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FAM90A18PA6NE21 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A16PA6NEW6 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A20PA6NIJ5 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A8PA6NJQ4 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A7PA6NKC0 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A22PA8MWA6 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A12PA8MX19 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A5PA8MXJ8 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A23PA8MXZ1 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 C22orf46C9J442 243 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ENSAO43768 121 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A15PP0C7V4 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A13PP0C7W8 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A14PP0C7W9 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A24PP0C7X0 464 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SNRPBP14678 240 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR3A1P47881 315 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 DVL1P1P54792 670 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ATXN7L3Q14CW9 347 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SUMF2Q8NBJ7 301 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR4M2Q8NGB6 313 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR4M1Q8NGD0 313 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 NEK7Q8TDX7 302 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RAB40AQ8WXH6 277 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ISOC1Q96CN7 298 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BCL7BQ9BQE9 202 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 NUDT16L1Q9BRJ7 211 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 NICN1Q9BSH3 213 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 DPCDQ9BVM2 203 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 GSX1Q9H4S2 264 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 IFT22Q9H7X7 185 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SPACA1Q9HBV2 294 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 YAE1D1Q9NRH1 226 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ING3Q9NXR8 418 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RPUSD1Q9UJJ7 312 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CEPT1Q9Y6K0 416 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ABCA1O95477 2261 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PPIAL4CA0A0B4J2A2 164 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 IGHV2-70DA0A0C4DH43 119 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 H3BUI4 141 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MGST3O14880 152 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LDLRAD4O15165 306 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PAHP00439 452 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RORCP51449 518 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SPCS2Q15005 226 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 C11orf91Q3C1V1 193 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 NKAPLQ5M9Q1 402 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RAB12Q6IQ22 244 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAHD2BQ6P2I3 314 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BRICD5Q6PL45 260 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM185AQ8N0U4 392 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LGALS14Q8TCE9 139 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAHD2AQ96GK7 314 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 NEDD4LQ96PU5 975 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MRI1Q9BV20 369 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TM2D1Q9BX74 207 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LPAR5Q9H1C0 372 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FBLN5Q9UBX5 448 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PEX16Q9Y5Y5 336 aa11.98□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TRBV23-1A0A0A0MS06 115 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FUOMA2VDF0 154 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MCRIP1C9JLW8 97 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TMEM127O75204 238 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CSN2P05814 226 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RAB6AP20340 208 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FUT3P21217 361 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 GATA3P23771 443 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BLVRBP30043 206 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 VEGFCP49767 419 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 EFNB2P52799 333 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RPL31P62899 125 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 AESQ08117 197 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PLA2G7Q13093 441 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM189A2Q15884 450 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 KRBOX4Q5JUW0 171 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TPRX1Q8N7U7 411 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BARHL1Q9BZE3 327 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ABRACLQ9P1F3 81 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 INSIG2Q9Y5U4 225 aa11.97□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■■□□ 16.3
TNFRSF1A-216ENST00000543995 KIR2DS1A0A191URI9 304 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 DPPA5A6NC42 116 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 METTL21EPA6NDL7 271 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A8MV72 311 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 H3BMQ9 156 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LIPFP07098 398 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SOX6P35712 828 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SCAND1P57086 179 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PAX2Q02962 417 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SIGIRRQ6IA17 410 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR56B1Q8NGI3 324 aa11.96□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PTX4Q96A99 478 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms