RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 DMRTB1Q96MA1 342 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 WDFY2Q96P53 400 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 TBX15Q96SF7 602 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 PCGF1Q9BSM1 259 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 PCDHB16Q9NRJ7 776 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 GHRLQ9UBU3 117 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 V9GY05 133 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 SMIM30A4D0T7 59 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 HSPB6O14558 160 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 OR7C1O76099 320 aaPredicted RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 FAM157CP0CG43 387 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 UBBP0CG47 229 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 RAB3BP20337 219 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 CLDN12P56749 244 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 QRFPP83859 136 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 UNC119Q13432 240 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 ZNF273Q14593 569 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 ATXN7L3Q14CW9 347 aaPredicted RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 RAB11BQ15907 218 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 TAF9Q16594 264 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 MPV17LQ2QL34 196 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 PAN3Q58A45 887 aaKnown RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 HES5Q5TA89 166 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 TCF23Q7RTU1 214 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 LINC00596Q86U02 117 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 NANPQ8TBE9 248 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 Q96M66 194 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 CENPOQ9BU64 300 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 MRPS26Q9BYN8 205 aaKnown RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 SELENOIQ9C0D9 397 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 IFT22Q9H7X7 185 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 KPTNQ9Y664 436 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
CD9-210ENST00000543916 WNK2Q9Y3S1 2297 aa12.41□□□□□ -0.42
CD9-210ENST00000543916 ZFHX3Q15911 3703 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 IGHV3OR16-10A0A075B7F0 116 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 TRAV40A0A0B4J280 105 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 TMEM14DPA8MWL7 114 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 BPNT1O95861 308 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 MPIG6BO95866 241 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 CSN2P05814 226 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 IGHV4-38-2P0DP08 117 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 CCL3L1P16619 93 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 GLIPR1P48060 266 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 DLX1P56177 255 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 P2RX3P56373 397 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 AESQ08117 197 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 VMO1Q7Z5L0 202 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 SUMF2Q8NBJ7 301 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 OR51D1Q8NGF3 324 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 OR13F1Q8NGS4 319 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 PPP1R35Q8TAP8 253 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 COQ2Q96H96 371 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 CYYR1Q96J86 154 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 KCTD7Q96MP8 289 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 CST11Q9H112 138 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 CUBNO60494 3623 aa12.4□□□□□ -0.42
CD9-210ENST00000543916 IFITM5A6NNB3 132 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 M0R1W7 72 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 CLEC2LP0C7M8 214 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 CFPP27918 469 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 ERP29P30040 261 aaKnown RBP12.39□□□□□ -0.43
CD9-210ENST00000543916 SDC2P34741 201 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 TGFBR1P36897 503 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 PSMD7P51665 324 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 DLX6P56179 175 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 PRB3Q04118 309 aaPredicted RBP12.39□□□□□ -0.43
CD9-210ENST00000543916 MEF2CQ06413 473 aaPredicted RBP12.39□□□□□ -0.43
CD9-210ENST00000543916 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 PLPPR1Q8TBJ4 325 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 DPCDQ9BVM2 203 aaPredicted RBP12.39□□□□□ -0.43
CD9-210ENST00000543916 FUNDC2Q9BWH2 189 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 SIRT7Q9NRC8 400 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 ING3Q9NXR8 418 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 RCC2Q9P258 522 aaKnown RBP12.39□□□□□ -0.43
CD9-210ENST00000543916 STEAP1Q9UHE8 339 aa12.39□□□□□ -0.43
CD9-210ENST00000543916 AIREO43918 545 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 TFAP2AP05549 437 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
CD9-210ENST00000543916 ARSBP15848 533 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 EPHA1P21709 976 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 ERVFRD-1P60508 538 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
CD9-210ENST00000543916 MXD1Q05195 221 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 KLRD1Q13241 179 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 TIMM50Q3ZCQ8 353 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 KRBOX4Q5JUW0 171 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 ATAD3CQ5T2N8 411 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 SIGIRRQ6IA17 410 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 GDPGP1Q6ZNW5 385 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 C1orf122Q6ZSJ8 110 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 OR2W3Q7Z3T1 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms