RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FBXO16Q8IX29 292 aaPredicted RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TCTE3Q8IZS6 198 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PGAM4Q8N0Y7 254 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 EIF4E3Q8N5X7 224 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 KLHL30-AS1Q8NEE0 82 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR4M2Q8NGB6 313 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR6Q1Q8NGQ2 317 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR2L8Q8NGY9 312 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR2G3Q8NGZ4 309 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 DEDD2Q8WXF8 326 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 UCN3Q969E3 161 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 IL22RA2Q969J5 263 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 RPUSD4Q96CM3 377 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF689Q96CS4 500 aaPredicted RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TSNAXQ99598 290 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 VGLL1Q99990 258 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TCEAL7Q9BRU2 100 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 NICN1Q9BSH3 213 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 MND1Q9BWT6 205 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SRRQ9GZT4 340 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PLEKHA1Q9HB21 404 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SIRT7Q9NRC8 400 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 MED9Q9NWA0 146 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SLC25A37Q9NYZ2 338 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TMEM216Q9P0N5 145 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF629Q9UEG4 869 aaPredicted RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 CES1P1Q9UKY3 287 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR51B2Q9Y5P1 312 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PUS1Q9Y606 427 aaKnown RBP eCLIP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 A0A0G2JMZ2 1700 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 BRWD1Q9NSI6 2320 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PRRC2BQ5JSZ5 2229 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 BPTFQ12830 3046 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 MGAMO43451 1857 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 IGLV1-36A0A0B4J1U3 117 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 H7C1H1 209 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 I3L521 148 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ITGB1BP1O14713 200 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 TOX3O15405 576 aaPredicted RBP2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 RGS5O15539 181 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 EMC8O43402 210 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 SGCEO43556 437 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ENSAO43768 121 aaKnown RBP2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 RDH16O75452 317 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 NSA2O95478 260 aaKnown RBP2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 EIF4EP06730 217 aaKnown RBP2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 GP1BAP07359 652 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 OR4E1P0C645 316 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ZDHHC11BP0C7U3 371 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 CHTF8P0CG12 524 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PGA4P0DJD7 388 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PGA3P0DJD8 388 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 CD37P11049 281 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ME2P23368 584 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ELK4P28324 431 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 TEAD1P28347 426 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 CRABP1P29762 137 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 GNRHRP30968 328 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 KDELR2P33947 212 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PFN2P35080 140 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 CDKN2BP42772 138 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 GCLMP48507 274 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ACOT2P49753 483 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 AKR1D1P51857 326 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 DIO3P55073 304 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 DEFA1P59665 94 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 DEFA3P59666 94 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PRPS1P60891 318 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 REG3AQ06141 175 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 TCP10Q12799 353 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PRPSAP1Q14558 356 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 SMCO1Q147U7 214 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 QPRTQ15274 297 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 NSDHLQ15738 373 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 GRK1Q15835 563 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 Q1RN00 199 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 LRRC10Q5BKY1 277 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PABPC1L2AQ5JQF8 200 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 GCSAMLQ5JQS6 135 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 CLLU1Q5K131 121 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 N4BP2L1Q5TBK1 243 aaPredicted RBP2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 LAIR2Q6ISS4 152 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF773Q6PK81 442 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 METTL7BQ6UX53 244 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 AHSA2Q719I0 299 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 TMEM179BQ7Z7N9 219 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 C10orf107Q8IVU9 208 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ENTHD1Q8IYW4 607 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 PACRGLQ8N7B6 248 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 CHST4Q8NCG5 386 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 TMEM35BQ8NCS4 154 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 BPIFB6Q8NFQ5 453 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 OR1M1Q8NGA1 313 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 OR4M1Q8NGD0 313 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 OR51G1Q8NGK1 321 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 OR10J6PQ8NGY7 276 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 OR6X1Q8NH79 312 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 RHOXF1Q8NHV9 184 aa2.91□□□□□ -1.94
SFSWAP-211ENST00000542813 ACTL9Q8TC94 416 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms