RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ZNF230Q9UIE0 474 aaPredicted RBP23.38■■□□□ 1.33
CCM2-218ENST00000541586 POLQO75417 2590 aa23.38■■□□□ 1.33
CCM2-218ENST00000541586 C17orf100A8MU93 164 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 DNASE1P24855 282 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 PMELP40967 661 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 BCAP31P51572 246 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 HOGA1Q86XE5 327 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 ITLN1Q8WWA0 313 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 CSMD1Q96PZ7 3565 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 NUDT15Q9NV35 164 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 NUBP2Q9Y5Y2 271 aa23.37■■□□□ 1.33
CCM2-218ENST00000541586 WNT9BO14905 357 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 TPD52L2O43399 206 aaKnown RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 HOXA4Q00056 320 aaPredicted RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 ZNF782Q6ZMW2 699 aaPredicted RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 WDR13Q9H1Z4 485 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 ZNF701Q9NV72 531 aaPredicted RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 IL19Q9UHD0 177 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 H3BUI4 141 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 OVOL3O00110 214 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 PPOXP50336 477 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 CCL8P80075 99 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 MRPS15P82914 257 aaKnown RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 TNFAIP6P98066 277 aaPredicted RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 ZNF146Q15072 292 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 CADM3Q8N126 398 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 IGFBPL1Q8WX77 278 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 MAFIPQ8WZ33 124 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 IFT22Q9H7X7 185 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 SPACA1Q9HBV2 294 aa23.36■■□□□ 1.33
CCM2-218ENST00000541586 FBXO9Q9UK97 447 aaPredicted RBP23.36■■□□□ 1.33
CCM2-218ENST00000541586 CHD3Q12873 2000 aaKnown RBP23.35■■□□□ 1.33
CCM2-218ENST00000541586 TNFSF4P23510 183 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 HRH1P35367 487 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 Q6P435 159 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 MOGAT3Q86VF5 341 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 OR51S1Q8NGJ8 323 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 OR4K15Q8NH41 348 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 LRRC29Q8WV35 223 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 RAB1BQ9H0U4 201 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 FN3KRPQ9HA64 309 aa23.35■■□□□ 1.33
CCM2-218ENST00000541586 TRAV6A0A075B6T7 132 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 TRAV24A0A0B4J272 114 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 INMT-MINDY4F8WBC2 141 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 NDUFS7O75251 213 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 GLRA1P23415 457 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 RBMXP38159 391 aaKnown RBP23.34■■□□□ 1.33
CCM2-218ENST00000541586 GATA4P43694 442 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 MEF2DQ14814 521 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 RNASE10Q5GAN6 216 aaKnown RBP23.34■■□□□ 1.33
CCM2-218ENST00000541586 SPIN3Q5JUX0 258 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 BTN2A1Q7KYR7 527 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 SUMF2Q8NBJ7 301 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 BEST4Q8NFU0 473 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 ITPR2Q14571 2701 aa23.34■■□□□ 1.33
CCM2-218ENST00000541586 A0A0B4J293 547 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 HSPB6O14558 160 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 DEGS1O15121 323 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 AMY2AP04746 511 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 ZNF735P0CB33 412 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 TBPP20226 339 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 DTYMKP23919 212 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 CFHR2P36980 270 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 RAB25P57735 213 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 ACP7Q6ZNF0 438 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 OR10Z1Q8NGY1 313 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 DIRC2Q96SL1 478 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 DECR2Q9NUI1 292 aa23.33■■□□□ 1.33
CCM2-218ENST00000541586 MCRIP1C9JLW8 97 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 ADH4P08319 380 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 FCGR3AP08637 254 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 ZNF44P15621 663 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 AMY2BP19961 511 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 MICBQ29980 383 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 FIP1L1Q6UN15 594 aaKnown RBP23.33■■□□□ 1.32
CCM2-218ENST00000541586 BPIFB2Q8N4F0 458 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 PERPQ96FX8 193 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 SLC6A7Q99884 636 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 C12orf4Q9NQ89 552 aa23.33■■□□□ 1.32
CCM2-218ENST00000541586 OR2H2O95918 312 aa23.32■■□□□ 1.32
CCM2-218ENST00000541586 PMP2P02689 132 aa23.32■■□□□ 1.32
CCM2-218ENST00000541586 CSN2P05814 226 aa23.32■■□□□ 1.32
CCM2-218ENST00000541586 RDH5Q92781 318 aa23.32■■□□□ 1.32
CCM2-218ENST00000541586 DPCDQ9BVM2 203 aaPredicted RBP23.32■■□□□ 1.32
CCM2-218ENST00000541586 C20orf85Q9H1P6 137 aa23.32■■□□□ 1.32
CCM2-218ENST00000541586 LY6HO94772 140 aa23.31■■□□□ 1.32
CCM2-218ENST00000541586 NDUFB6O95139 128 aa23.31■■□□□ 1.32
CCM2-218ENST00000541586 CHST6Q9GZX3 395 aa23.31■■□□□ 1.32
CCM2-218ENST00000541586 GCM1Q9NP62 436 aa23.31■■□□□ 1.32
CCM2-218ENST00000541586 IGKV1D-8A0A087WSZ0 117 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 SRRM5B3KS81 715 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 SH2D1BO14796 132 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 GLAP06280 429 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 CD55P08174 381 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 EGR1P18146 543 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 BTG1P62324 171 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 TATDN3Q17R31 274 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 SMIM21Q3B7S5 101 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 ACTBL2Q562R1 376 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 NEK7Q8TDX7 302 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms