RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 OR10K1Q8NGX5 313 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 NDNFQ8TB73 568 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 SLC25A46Q96AG3 418 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 HYLS1Q96M11 299 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 CST11Q9H112 138 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 IGHV3OR15-7A0A075B7D8 119 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 F8VVB4 439 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 F8VWA3 439 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 CRTAPO75718 401 aaPredicted RBP12.92□□□□□ -0.34
DDB1-216ENST00000539739 GTF2F2P13984 249 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 FGF12P61328 243 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 HOXA4Q00056 320 aaPredicted RBP12.92□□□□□ -0.34
DDB1-216ENST00000539739 OSR2Q8N2R0 312 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 SPICQ8N5J4 248 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.92□□□□□ -0.34
DDB1-216ENST00000539739 Q8NFD4 153 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 OR4D10Q8NGI6 311 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 KCNG3Q8TAE7 436 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 SLC25A28Q96A46 364 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 FAM3DQ96BQ1 224 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
DDB1-216ENST00000539739 GHITMQ9H3K2 345 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 MED9Q9NWA0 146 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 MRPS7Q9Y2R9 242 aaKnown RBP12.92□□□□□ -0.34
DDB1-216ENST00000539739 KCNK7Q9Y2U2 307 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 PDZD2O15018 2839 aa12.92□□□□□ -0.34
DDB1-216ENST00000539739 MEIOCA2RUB1 952 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 VWC2LB2RUY7 222 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.91□□□□□ -0.34
DDB1-216ENST00000539739 KNG1P01042 644 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 SLC2A2P11168 524 aaPredicted RBP12.91□□□□□ -0.34
DDB1-216ENST00000539739 RORCP51449 518 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 CLDN12P56749 244 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 GRK1Q15835 563 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 TMEM155Q4W5P6 130 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 SPIN3Q5JUX0 258 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 IDNKQ5T6J7 187 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 SNX29P2Q8IUI4 249 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 OR51D1Q8NGF3 324 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 ST8SIA4Q92187 359 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 SEH1LQ96EE3 360 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 MRI1Q9BV20 369 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 PCDHB10Q9UN67 800 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 SESN1Q9Y6P5 492 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 KRBOX1C9JBD0 128 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 WRBO00258 174 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 TSC22D2O75157 780 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 GYPAP02724 150 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 CALCBP10092 127 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 PSG2P11465 335 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 SOX6P35712 828 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 RAB13P51153 203 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 C2orf76Q3KRA6 126 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 OR2W3Q7Z3T1 314 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 OR4M2Q8NGB6 313 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 PHF21AQ96BD5 680 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
DDB1-216ENST00000539739 Q96MF0 132 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 OR14J1Q9UGF5 321 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 CSMD1Q96PZ7 3565 aa12.91□□□□□ -0.34
DDB1-216ENST00000539739 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 SH2D1BO14796 132 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 RGS5O15539 181 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 SNAPC5O75971 98 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 MPIG6BO95866 241 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 IFNA4P05014 189 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 VSIG8P0DPA2 414 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 RRASP10301 218 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 MGMTP16455 207 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 GABRA2P47869 451 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 MEOX2P50222 304 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
DDB1-216ENST00000539739 ZNF146Q15072 292 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 STUMQ69YW2 141 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 SLC36A1Q7Z2H8 476 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 KRTAP1-3Q8IUG1 177 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 OR4M1Q8NGD0 313 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 OR51T1Q8NGJ9 327 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 FAM46BQ96A09 425 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 SHARPINQ9H0F6 387 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 DNTTIP1Q9H147 329 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 BANF2Q9H503 90 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 ST3GAL6Q9Y274 331 aa12.9□□□□□ -0.34
DDB1-216ENST00000539739 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
DDB1-216ENST00000539739 A0A1W2PP11 408 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 TMEM82A0PJX8 343 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 NKX6-3A6NJ46 265 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 TMEM14DPA8MWL7 114 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 IFNA7P01567 189 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 HEXAP06865 529 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 PRDX2P32119 198 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 SCAND1P57086 179 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 IL13RA2Q14627 380 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 NHLRC3Q5JS37 347 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms