RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 PFDN2Q9UHV9 154 aa11.64□□□□□ -0.55
FOXRED1-218ENST00000534315 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
FOXRED1-218ENST00000534315 MEMO1Q9Y316 297 aa11.64□□□□□ -0.55
FOXRED1-218ENST00000534315 INTS1Q8N201 2190 aaKnown RBP11.64□□□□□ -0.55
FOXRED1-218ENST00000534315 MUC6Q6W4X9 2439 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 CEP250Q9BV73 2442 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 CEACAM1P13688 526 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 UCP3P55916 312 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 FOXF2Q12947 444 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 TMEM187Q14656 261 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 ACSF3Q4G176 576 aaPredicted RBP11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 SUMF2Q8NBJ7 301 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 WNT2BQ93097 391 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 DLL3Q9NYJ7 618 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 J3QT63 122 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 SHOXO15266 292 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 SCTP09683 121 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 PET100P0DJ07 73 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 GLI4P10075 376 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 COX5AP20674 150 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 ALKBH6Q3KRA9 238 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 INO80CQ6PI98 192 aaPredicted RBP11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 WDR86Q86TI4 376 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 FOXRED2Q8IWF2 684 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 FAM58AQ8N1B3 248 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 SLC25A40Q8TBP6 338 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 PHYHIPLQ96FC7 376 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 RSRP1Q9BUV0 290 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 GVINP1Q7Z2Y8 2422 aa11.63□□□□□ -0.55
FOXRED1-218ENST00000534315 TRAV24A0A0B4J272 114 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 TM4SF5O14894 197 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 BET1O15155 118 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 AGFG2O95081 481 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 CNOT4O95628 575 aaKnown RBP11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 IFNA21P01568 189 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 HERPUD1Q15011 391 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 SRSF7Q16629 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 ZADH2Q8N4Q0 377 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 LRRC20Q8TCA0 184 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 RDH5Q92781 318 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 RTL8AQ9BWD3 113 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 HS3ST1O14792 307 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 UCP2P55851 309 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 SNTB1Q13884 538 aaKnown RBP11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 IL13RA2Q14627 380 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 ZNF169Q14929 603 aaPredicted RBP11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 RTP5Q14D33 572 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 WDR31Q8NA23 367 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 AQP10Q96PS8 301 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 SYT3Q9BQG1 590 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 SUCNR1Q9BXA5 334 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 SPACA1Q9HBV2 294 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
FOXRED1-218ENST00000534315 ZNF585AQ6P3V2 769 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 LIAT1Q6ZQX7 453 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 CNTNAP3BQ96NU0 1288 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 SLX1AQ9BQ83 275 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 ADAT1Q9BUB4 502 aaKnown RBP11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 CNTNAP3Q9BZ76 1288 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 DNAJB11Q9UBS4 358 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 DKK4Q9UBT3 224 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 TUBD1Q9UJT1 453 aa11.61□□□□□ -0.55
FOXRED1-218ENST00000534315 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 LRP5LA4QPB2 252 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 TRDCB7Z8K6 153 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 TK1P04183 234 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 RAC2P15153 192 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 CBR1P16152 277 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 HOXC12P31275 282 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 PSG7Q13046 419 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 PAN3Q58A45 887 aaKnown RBP11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 FAM76BQ5HYJ3 339 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 OR2A2Q6IF42 318 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 CCDC71LQ8N9Z2 235 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 SHARPINQ9H0F6 387 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 ATP23Q9Y6H3 246 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 KIR2DS1A0A191URI9 304 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 IQCF6A8MYZ5 107 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 AHRRA9YTQ3 701 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 PHF1O43189 567 aaPredicted RBP11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 SLC34A2O95436 690 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 DIRAS3O95661 229 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 IGKV3-15P01624 115 aa11.6□□□□□ -0.55
FOXRED1-218ENST00000534315 FGF2P09038 288 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms