RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CYP51A1Q16850 503 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 IZUMO4Q1ZYL8 232 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 TRIM16LQ309B1 348 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ALG10Q5BKT4 473 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 C6orf10Q5SRN2 563 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GLYATL3Q5SZD4 288 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 HIST2H3PS2Q5TEC6 136 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ASPHD1Q5U4P2 390 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 KCTD8Q6ZWB6 473 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 HIST2H3AQ71DI3 136 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 PRSS45Q7RTY3 260 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DPY19L4Q7Z388 723 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CATSPERDQ86XM0 798 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MSRB3Q8IXL7 192 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DHRSXQ8N5I4 330 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SETD9Q8NE22 299 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM185AQ8NFB2 350 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 OR5D13Q8NGL4 314 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 OR5M8Q8NGP6 311 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 OR9I1Q8NGQ6 314 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 OR2T27Q8NH04 317 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ANGPTL6Q8NI99 470 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 C2CD4CQ8TF44 421 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 LZICQ8WZA0 190 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DCUN1D4Q92564 292 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 BORCS5Q969J3 196 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC35B4Q969S0 331 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 C12orf43Q96C57 262 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MALSU1Q96EH3 234 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 Q96M85 177 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 NSMCE2Q96MF7 247 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF488Q96MN9 340 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 OR5B12Q96R08 314 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC25A33Q9BSK2 321 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ALG12Q9BV10 488 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ST6GALNAC5Q9BVH7 336 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 C1orf21Q9H246 121 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CACYBPQ9HB71 228 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GID8Q9NWU2 228 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC25A37Q9NYZ2 338 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MSRB1Q9NZV6 116 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 PAIP2BQ9ULR5 123 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 RBMX2Q9Y388 322 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 RHBDD3Q9Y3P4 386 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ADAM18Q9Y3Q7 739 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 LYVE1Q9Y5Y7 322 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CEPT1Q9Y6K0 416 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MUC4Q99102 2169 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 A0A1B0GVY2 172 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 RPS10-NUDT3A0A1W2PQS6 291 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TRAPPC13A5PLN9 417 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM172BPA6NC97 362 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR2AT4A6NND4 320 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 BBIP1A8MTZ0 92 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SERPINE3A8MV23 424 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 NME4O00746 187 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 RRHO14718 337 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ARPC2O15144 300 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC22A2O15244 555 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SAP30O75446 220 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF682O95780 498 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 FADS2O95864 444 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 IFNA6P05013 189 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 GNAO1P09471 354 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TSPAN19P0C672 248 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 PSKH1P11801 424 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 FCGR1AP12314 374 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 LBPP18428 481 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 PSMB9P28065 219 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 CAPGP40121 348 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 RPS27P42677 84 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 GPR12P47775 334 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC9A3P48764 834 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 DYNLT3P51808 116 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 PRKXP51817 358 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 RPL31P62899 125 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 CDK6Q00534 326 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 LIPEQ05469 1076 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TRAP1Q12931 704 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 MAD2L1Q13257 205 aaPredicted RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 APOFQ13790 326 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SCARB2Q14108 478 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 KIR2DS1Q14954 304 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 RGS21Q2M5E4 152 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ANKDD1AQ495B1 522 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ZBED5Q49AG3 693 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM98BQ52LJ0 330 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 MESTQ5EB52 335 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 GCNT6Q5T4J0 391 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM27D1Q5T7N8 215 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 METTL21CQ5VZV1 264 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM236Q5W0B7 351 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 REEP3Q6NUK4 255 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF613Q6PF04 617 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TBPL2Q6SJ96 375 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TMPRSS11FQ6ZWK6 438 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 MRPL21Q7Z2W9 205 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TSEN54Q7Z6J9 526 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ERI1Q8IV48 349 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 CROCCP3Q8IVE0 287 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms