RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZFP41Q8N8Y5 198 aa24.55■■□□□ 1.52
SSSCA1-207ENST00000533115 OR13C5Q8NGS8 318 aa24.55■■□□□ 1.52
SSSCA1-207ENST00000533115 TFAP2CQ92754 450 aa24.55■■□□□ 1.52
SSSCA1-207ENST00000533115 TMEM138Q9NPI0 162 aa24.55■■□□□ 1.52
SSSCA1-207ENST00000533115 NKX1-2Q9UD57 310 aaPredicted RBP24.55■■□□□ 1.52
SSSCA1-207ENST00000533115 TRGV10A0A0A0MS01 117 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 TRBV5-5A0A0J9YX44 114 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 CLPXO76031 633 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 CSN2P05814 226 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 GLIPR1P48060 266 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 DYNC1I2Q13409 638 aaKnown RBP24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 AHSA2Q719I0 299 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 STX19Q8N4C7 294 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 BPIFB6Q8NFQ5 453 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 NR1H4Q96RI1 486 aaPredicted RBP24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 FAM192AQ9GZU8 254 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 PKD1L1Q8TDX9 2849 aa24.54■■□□□ 1.52
SSSCA1-207ENST00000533115 SLC34A1Q06495 639 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 RSU1Q15404 277 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 YIF1BQ5BJH7 314 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 ASCL4Q6XD76 172 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 DYNAPQ8N1N2 210 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 CORO2AQ92828 525 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 FOXRED1Q96CU9 486 aaPredicted RBP24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 ORAI1Q96D31 301 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 MALSU1Q96EH3 234 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 PGLYRP3Q96LB9 341 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 TMEM133Q9H2Q1 129 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 GAL3ST2Q9H3Q3 398 aa24.53■■□□□ 1.52
SSSCA1-207ENST00000533115 VGLL3A8MV65 326 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 C21orf33P30042 268 aaPredicted RBP24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 PTGFRP43088 359 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 OR3A4PP47883 348 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 PROK1P58294 105 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 TAS2R43P59537 309 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 RPS11P62280 158 aaKnown RBP eCLIP24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 Q499Y3 187 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 KRBOX4Q5JUW0 171 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 DDI2Q5TDH0 399 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 BRICD5Q6PL45 260 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 Q8NFD4 153 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 OR51T1Q8NGJ9 327 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 OR10K1Q8NGX5 313 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 PIFOQ8TCI5 191 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 COQ2Q96H96 371 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 NKX3-1Q99801 234 aaPredicted RBP24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 CITED1Q99966 193 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 TAS2R3Q9NYW6 316 aa24.52■■□□□ 1.52
SSSCA1-207ENST00000533115 IGHV2-26A0A0B4J1V2 119 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 ODAMA1E959 279 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 H0YJX3 145 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 MMP23AO75900 390 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 IGFBP3P17936 291 aaPredicted RBP24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 BDKRB2P30411 391 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 ZNF93P35789 620 aaPredicted RBP24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 KRTAP10-3P60369 221 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 IL13RA2Q14627 380 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 LDLRAD2Q5SZI1 272 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 CLEC7AQ9BXN2 247 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 FKBP14Q9NWM8 211 aa24.51■■□□□ 1.51
SSSCA1-207ENST00000533115 MYL12BO14950 172 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 RIPK1Q13546 671 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 ATXN7L3Q14CW9 347 aaPredicted RBP24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 SSX2Q16385 188 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 PLA1AQ53H76 456 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 SLC35E4Q6ICL7 350 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 RAB18Q9NP72 206 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 ING3Q9NXR8 418 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 ING4Q9UNL4 249 aa24.5■■□□□ 1.51
SSSCA1-207ENST00000533115 GPX5O75715 221 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 HTR3BO95264 441 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 WNT4P56705 351 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 FAM189A2Q15884 450 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 MINOS1Q5TGZ0 78 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 PRAMEF5Q5TYX0 476 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 OR52W1Q6IF63 320 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 HEPN1Q6WQI6 88 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 LIAT1Q6ZQX7 453 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 METTL9Q9H1A3 318 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 CKLFQ9UBR5 152 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 MINOS1-NBL1R4GNA1 71 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 KIAA2026Q5HYC2 2103 aa24.49■■□□□ 1.51
SSSCA1-207ENST00000533115 TRAV24A0A0B4J272 114 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 PNMA8CA0A1B0GUJ8 204 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 CDRT1O95170 752 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 CDK2P24941 298 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 PIGYQ3MUY2 71 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 PAN3Q58A45 887 aaKnown RBP24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 NANOGP1Q8N7R0 232 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 IL36GQ9NZH8 169 aa24.48■■□□□ 1.51
SSSCA1-207ENST00000533115 HSPB6O14558 160 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 RAB13P51153 203 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 NRG4Q8WWG1 115 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 OR14A2Q96R54 314 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 S100A13Q99584 98 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 ZNF184Q99676 751 aaPredicted RBP24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 PPIL3Q9H2H8 161 aaKnown RBP24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 ABCB10Q9NRK6 738 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 OR6C3Q9NZP0 311 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 FBLN5Q9UBX5 448 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms