RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 MRGPRDQ8TDS7 321 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 DEFB126Q9BYW3 111 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 NAT8Q9UHE5 227 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF346Q9UL40 294 aaKnown RBP6□□□□□ -1.45
TGFBR3-209ENST00000532540 TIMM8BQ9Y5J9 83 aaPredicted RBP6□□□□□ -1.45
TGFBR3-209ENST00000532540 DUXBA0A1W2PPF3 345 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 H7C1C5 153 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 TMPRSS11DO60235 418 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 GLI4P10075 376 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 CRISP2P16562 243 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 TNFSF4P23510 183 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 AMTP48728 403 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ASCL1P50553 236 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 SRPXP78539 464 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF90Q03938 601 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 SCGB2A2Q13296 93 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 RSPO4Q2I0M5 234 aaPredicted RBP6□□□□□ -1.45
TGFBR3-209ENST00000532540 PRSS33Q8NF86 280 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 OR1N1Q8NGS0 311 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 OR1L3Q8NH93 324 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ROBO4Q8WZ75 1007 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 DIRC2Q96SL1 478 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 RNF2Q99496 336 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 RARRES2Q99969 163 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 HSPB9Q9BQS6 159 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 GINS3Q9BRX5 216 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 CHST11Q9NPF2 352 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 P4HTMQ9NXG6 502 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PTPRSQ13332 1948 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PATJQ8NI35 1801 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 TRAV8-7A0A075B6U6 113 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 C17orf105B2RV13 164 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 DIRC3C9JPN6 131 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PHF1O43189 567 aaPredicted RBP6□□□□□ -1.45
TGFBR3-209ENST00000532540 CLEC3AO75596 197 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 NTN1O95631 604 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 CD1AP06126 327 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 CXCL1P09341 107 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PMCHP20382 165 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 RND3P61587 244 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 OR4F5Q8NH21 305 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 MOB3AQ96BX8 217 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 MS4A6EQ96DS6 147 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PGAM5Q96HS1 289 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 OR4F4Q96R69 305 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ATP5SQ99766 215 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 MENTQ9BUN1 341 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC26A1Q9H2B4 701 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 C1orf198Q9H425 327 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 MRPS28Q9Y2Q9 187 aaKnown RBP6□□□□□ -1.45
TGFBR3-209ENST00000532540 PTPN13Q12923 2485 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 FREM2Q5SZK8 3169 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 LTBP2Q14767 1821 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 A8MVM7 634 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 E9PQ18 207 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 PIN1P1O15428 100 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 OR7C2O60412 319 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 F13BP05160 661 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 GSTP1P09211 210 aaKnown RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 FAM157CP0CG43 387 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 TMEM225BP0DP42 221 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 PNLIPP16233 465 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 GLRA1P23415 457 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 BLVRBP30043 206 aaPredicted RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 FHITP49789 147 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 GAS1P54826 345 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 RAB38P57729 211 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 RPL24P83731 157 aaKnown RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 COL10A1Q03692 680 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 ZXDCQ2QGD7 858 aaPredicted RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 PHLDA2Q53GA4 152 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 TMEM225Q6GV28 225 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF440Q8IYI8 595 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 OR4X1Q8NH49 305 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 FOXN4Q96NZ1 517 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 LPAR4Q99677 370 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 C20orf141Q9NUB4 165 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC22A13Q9Y226 551 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 RCL1Q9Y2P8 373 aaKnown RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 TSC2P49815 1807 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A087WUJ7 227 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 HSPB2A8KAH6 182 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 M0R1X1 148 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 TNFSF14O43557 240 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 RAC2P15153 192 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF93P35789 620 aaPredicted RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 CDKN1BP46527 198 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC6A9P48067 706 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 MSMO1Q15800 293 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 HSPB2Q16082 182 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 SPATA45Q537H7 98 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 ATP1A1-AS1Q5TC04 95 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 WDR25Q64LD2 544 aaPredicted RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC25A26Q70HW3 274 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 BAHD1Q8TBE0 780 aaPredicted RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 LINC00615Q96LM1 132 aaPredicted RBP5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 KIF26BQ2KJY2 2108 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 IGHV5-10-1A0A0J9YXX1 117 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC16A7O60669 478 aa5.99□□□□□ -1.45
TGFBR3-209ENST00000532540 OR4A8P0C604 315 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms