RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	ATRN	O75882	1429 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MYH3	P11055	1940 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGKV1D-8	A0A087WSZ0	117 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EXOC1L	A0A1B0GW35	172 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OR4C46	A6NHA9	309 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CLDN25	C9JDP6	229 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLC25A27	O95847	323 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CRYGD	P07320	174 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GGT1	P19440	569 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TSPO	P30536	169 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DYNLL1	P63167	89 aa	Known RBP	4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	INCA1	Q0VD86	236 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RSU1	Q15404	277 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SNRNP35	Q16560	246 aa	Known RBP	4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ECSCR	Q19T08	205 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SIRPB2	Q5JXA9	342 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PLET1	Q6UQ28	207 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ATG4D	Q86TL0	474 aa	Predicted RBP	4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBPMS	Q93062	196 aa	Known RBP	4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CNBD2	Q96M20	576 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EBF4	Q9BQW3	602 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MS4A8	Q9BY19	250 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TPT1P8	Q9HAU6	139 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SPANXA1	Q9NS26	97 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SS18L2	Q9UHA2	77 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ANXA10	Q9UJ72	324 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	NUP188	Q5SRE5	1749 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ARAP2	Q8WZ64	1704 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	WDR81	Q562E7	1941 aa		4.27	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TOGARAM1	Q9Y4F4	1720 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967		A0A0G2JLM5	398 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LINC01553	A4QN01	128 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967		B4DXG7	233 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CDX4	O14627	284 aa	Predicted RBP	4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF30	P17039	623 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EFNA3	P52797	238 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DNAJB13	P59910	316 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	HIST1H3A	P68431	136 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	H3F3A	P84243	136 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DOC2B	Q14184	412 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TMEM128	Q5BJH2	165 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LINC00242	Q5T6M2	205 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	HIST2H3A	Q71DI3	136 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBM23	Q86U06	439 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FTMT	Q8N4E7	242 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNRF1	Q8ND25	227 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	NT5C	Q8TCD5	201 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF778	Q96MU6	729 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SAR1A	Q9NR31	198 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RASL12	Q9NYN1	266 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TMEM216	Q9P0N5	145 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	AP4S1	Q9Y587	144 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	UBR2	Q8IWV8	1755 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DNASE2	O00115	360 aa	Predicted RBP	4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGF2	P01344	180 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FCGR3A	P08637	254 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PSG1	P11464	419 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GNB3	P16520	340 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FCGR2C	P31995	323 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PPIC	P45877	212 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OR1E2	P47887	323 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GZMM	P51124	257 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLURP1	P55000	103 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RAB5B	P61020	215 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RAP1A	P62834	184 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MICA	Q29983	383 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967		Q6ZN92	141 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ISOC1	Q96CN7	298 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PIK3IP1	Q96FE7	263 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LRTM1	Q9HBL6	345 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PLSCR3	Q9NRY6	295 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ADARB2	Q9NS39	739 aa	Known RBP	4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IDI2-AS1	Q9NZ38	188 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF223	Q9UK11	482 aa	Predicted RBP	4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	POLR1D	Q9Y2S0	133 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	UBIAD1	Q9Y5Z9	338 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	COL18A1	P39060	1754 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GLI3	P10071	1580 aa		4.26	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TMEM272	A0A1B0GTI8	110 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967		H7C1H1	209 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GALR3	O60755	368 aa	Predicted RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	STK16	O75716	305 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RND2	P52198	227 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBMS2	Q15434	407 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CLEC12A	Q5QGZ9	265 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FAM219B	Q5XKK7	198 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MRPL55	Q7Z7F7	128 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LNX1	Q8TBB1	728 aa	Predicted RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SSC4D	Q8WTU2	575 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNRF4	Q8WWF5	429 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SEH1L	Q96EE3	360 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TM2D1	Q9BX74	207 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GNG8	Q9UK08	70 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ST3GAL6	Q9Y274	331 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DCC	P43146	1447 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PHF3	Q92576	2039 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MEGF6	O75095	1541 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CKAP5	Q14008	2032 aa		4.25	□□□□□ -1.73

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