RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 MAS1LP35410 378 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 CLDN15P56746 228 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 FAM72AQ5TYM5 149 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 FAM72DQ6L9T8 149 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 FAM72BQ86X60 149 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 PTRH1Q86Y79 214 aaKnown RBP6.45□□□□□ -1.38
CTNND1-229ENST00000531014 NUBPLQ8TB37 319 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 NEUROG1Q92886 237 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 CLDN23Q96B33 292 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 RBKSQ9H477 322 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SLAMF8Q9P0V8 285 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 KLK11Q9UBX7 282 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SPCS1Q9Y6A9 102 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TRAV39A0A0B4J263 110 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SLC17A2O00624 439 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 MPDU1O75352 247 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 RAB9AP51151 201 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 ROM1Q03395 351 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 PSG5Q15238 335 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 CA13Q8N1Q1 262 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 STXBP6Q8NFX7 210 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 OR1P1Q8NH06 330 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 ZNF665Q9H7R5 613 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 DNAJC4Q9NNZ3 241 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 VSIG4Q9Y279 399 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 MED19A0JLT2 244 aaPredicted RBP6.45□□□□□ -1.38
CTNND1-229ENST00000531014 PRRG2O14669 202 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 IGHV4-34P06331 123 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 ADRA1AP35348 466 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 LPAR6P43657 344 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 MFAP2P55001 183 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 COL9A2Q14055 689 aaPredicted RBP6.45□□□□□ -1.38
CTNND1-229ENST00000531014 CDK5R1Q15078 307 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 XKR7Q5GH72 579 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 LILRA6Q6PI73 481 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SLC25A26Q70HW3 274 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SLC35E3Q7Z769 313 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TTC9CQ8N5M4 171 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TMEM38AQ9H6F2 299 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 R4GMQ9 66 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TRIOBPQ9H2D6 2365 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TRAV21A0A0B4J279 112 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 PMELP40967 661 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TMEM33P57088 247 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 MYBPHQ13203 477 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SHBQ15464 509 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 SP6Q3SY56 376 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 OR8G5Q8NG78 346 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 OR1B1Q8NGR6 318 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 ABHD14AQ9BUJ0 271 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 CMC2Q9NRP2 79 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 C20orf141Q9NUB4 165 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 MYO10Q9HD67 2058 aa6.45□□□□□ -1.38
CTNND1-229ENST00000531014 TRAV1-2A0A0B4J238 106 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 EPOPA6NHQ4 379 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 ERGP11308 486 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SPNP16150 400 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 DHRS2Q13268 280 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 NKAIN2Q5VXU1 208 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SLC23A3Q6PIS1 610 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 MED25Q71SY5 747 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 CAMKMTQ7Z624 323 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 NEURL3Q96EH8 262 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 VN1R1Q9GZP7 353 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 CACNG5Q9UF02 275 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 H3BMH7 237 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 FUT3P21217 361 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 FCGR2BP31994 310 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 FABP5Q01469 135 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 CFHR1Q03591 330 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SRSF5Q13243 272 aaKnown RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 DEFB109BQ30KR1 87 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 BHLHA15Q7RTS1 189 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 GBGT1Q8N5D6 347 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 RAB1CQ92928 201 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SPACA5Q96QH8 159 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 MEGF9Q9H1U4 602 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SLCO1C1Q9NYB5 712 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 AUP1Q9Y679 476 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 ATP23Q9Y6H3 246 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 PTPRZ1P23471 2315 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 A8MWL6 223 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 OR11H12B2RN74 326 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 KLRC4-KLRK1H3BQV0 150 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 TAPBPO15533 448 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 HLA-DQA1P01909 254 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 CRYAAP02489 173 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 P2RY2P41231 377 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 APOBEC1P41238 236 aaKnown RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 P2RY1P47900 373 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 B4GALNT1Q00973 533 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 SRSF4Q08170 494 aaKnown RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 DUSP8Q13202 625 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 WDR25Q64LD2 544 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-229ENST00000531014 RNF165Q6ZSG1 346 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 OR11H1Q8NG94 326 aa6.44□□□□□ -1.38
CTNND1-229ENST00000531014 OR4P4Q8NGL7 312 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms