RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 TMEM147Q9BVK8 224 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 SLC7A10Q9NS82 523 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 OR6C3Q9NZP0 311 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 TNFSF18Q9UNG2 199 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 VSIG4Q9Y279 399 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 HS3ST3A1Q9Y663 406 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 COL4A1P02462 1669 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 C1QL1O75973 258 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 KLK2P20151 261 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 CEBPDP49716 269 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-223ENST00000529986 MICBQ29980 383 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF770Q6IQ21 691 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-223ENST00000529986 C16orf47Q6ZP98 133 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-223ENST00000529986 LYG1Q8N1E2 194 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 D2HGDHQ8N465 521 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 TMEM116Q8NCL8 245 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 OR4P4Q8NGL7 312 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 PARD6GQ9BYG4 376 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-223ENST00000529986 OR51M1Q9H341 326 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 PARP11Q9NR21 331 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 CBLN4Q9NTU7 201 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 ARFGEF1Q9Y6D6 1849 aa6.76□□□□□ -1.33
CTNND1-223ENST00000529986 NKX2-6A6NCS4 301 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 B4DEV8 164 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 SPRY3O43610 288 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 CTSDP07339 412 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 PSG5Q15238 335 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 JMJD6Q6NYC1 403 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 SSX8Q7RTT4 187 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 LDLRAD3Q86YD5 345 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 BOD1Q96IK1 185 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 HSD17B10Q99714 261 aaKnown RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 RCC2Q9P258 522 aaKnown RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 A6NDN8 102 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MFSD2BA6NFX1 497 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 OR4C46A6NHA9 309 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 H0YIG0 161 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 OGG1O15527 345 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 SYNGR2O43760 224 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 ZGLP1P0C6A0 271 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 IRF3Q14653 427 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 CBLN3Q6UW01 205 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 TGIF2LYQ8IUE0 185 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 GPR27Q9NS67 375 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 UFC1Q9Y3C8 167 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 HELTA6NFD8 242 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 PDCD6O75340 191 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 SNRPCP09234 159 aaKnown RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 FAM157CP0CG43 387 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 ATP6V0CP27449 155 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 RUNX1Q01196 453 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MGAT2Q10469 447 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 SMIM21Q3B7S5 101 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF660Q6AZW8 331 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF738Q8NE65 137 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 FLYWCH2Q96CP2 140 aaKnown RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 ADAT3Q96EY9 351 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 FER1L6-AS2Q96M78 137 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 OR2A5Q96R48 311 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MANBALQ9NQG1 85 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 TAAR3PQ9P1P4 343 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 TGIF2-C20orf24A0A0A6YYL0 155 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 SOD3P08294 240 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 FAHD2BQ6P2I3 314 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 FDX2Q6P4F2 183 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 WFDC8Q8IUA0 241 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 FAHD2AQ96GK7 314 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 GPR61Q9BZJ8 451 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 TLNRD1Q9H1K6 362 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 ANXA10Q9UJ72 324 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 CBR3O75828 277 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MELTFP08582 738 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 RPS4Y1P22090 263 aaKnown RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MMP16P51512 607 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 WDR25Q64LD2 544 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-223ENST00000529986 GAPTQ8N292 157 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 RPS4Y2Q8TD47 263 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 MRGPRDQ8TDS7 321 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 OR5AC2Q9NZP5 309 aa6.75□□□□□ -1.33
CTNND1-223ENST00000529986 TRGV10A0A0A0MS01 117 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 NCBP2LA6PVI3 153 aaKnown RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 NKX2-2O95096 273 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 APCSP02743 223 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 CYC1P08574 325 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 PGA4P0DJD7 388 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 PGA5P0DJD9 388 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR3A1P47881 315 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 ID4P47928 161 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 NMUP48645 174 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SRSF5Q13243 272 aaKnown RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 SPATA45Q537H7 98 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 C1QL3Q5VWW1 255 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 C8orf82Q6P1X6 216 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-223ENST00000529986 UBALD2Q8IYN6 164 aa6.74□□□□□ -1.33
CTNND1-223ENST00000529986 OR4F17Q8NGA8 305 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms