RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 PDZK1IP1Q13113 114 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 FAM169BQ8N8A8 192 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 FBXO17Q96EF6 278 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 C1orf147Q96MC9 270 aaPredicted RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 CENPMQ9NSP4 180 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 FBXO24O75426 580 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 CD5P06127 495 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 MMP7P09237 267 aaPredicted RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 ZNF32P17041 273 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 ZNF93P35789 620 aaPredicted RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 SULT1A2P50226 295 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 PEA15Q15121 130 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 HIKESHIQ53FT3 197 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 ANGPTL5Q86XS5 388 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 OR5AS1Q8N127 324 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 OR13C9Q8NGT0 318 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 KCNG3Q8TAE7 436 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 RNASE6Q93091 150 aaKnown RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 SPTSSAQ969W0 71 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 MICU1Q9BPX6 476 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 OR2H1Q9GZK4 316 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 TMEM231Q9H6L2 316 aa12.54□□□□□ -0.4
NR1H3-231ENST00000529540 MRPS28Q9Y2Q9 187 aaKnown RBP12.54□□□□□ -0.4
NR1H3-231ENST00000529540 KALRNO60229 2985 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 OR6C6A6NF89 314 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 COLCA2A8K830 154 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 RNASEK-C17orf49H0YIS7 233 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 MFNGO00587 321 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 RER1O15258 196 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 CDC14BO60729 498 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 CLDN14O95500 239 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 ZNF20P17024 532 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 RAB1AP62820 205 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
NR1H3-231ENST00000529540 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 ANKRD55Q3KP44 614 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 C3orf36Q3SXR2 165 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 TMEM268Q5VZI3 342 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 GLIPR1L1Q6UWM5 242 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 OR5H2Q8NGV7 314 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 RTBDNQ9BSG5 229 aaPredicted RBP12.53□□□□□ -0.4
NR1H3-231ENST00000529540 NICN1Q9BSH3 213 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 ESPL1Q14674 2120 aa12.53□□□□□ -0.4
NR1H3-231ENST00000529540 ADAP1O75689 374 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 F12P00748 615 aaPredicted RBP12.52□□□□□ -0.4
NR1H3-231ENST00000529540 HLA-HP01893 362 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 GAPDHP04406 335 aaKnown RBP12.52□□□□□ -0.4
NR1H3-231ENST00000529540 RPS2P15880 293 aaKnown RBP12.52□□□□□ -0.4
NR1H3-231ENST00000529540 CCL1P22362 96 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 RAB5BP61020 215 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 PSG4Q00888 419 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 HMGN3Q15651 99 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 RTN4RL2Q86UN3 420 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 ZNF101Q8IZC7 436 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 OR13G1Q8NGZ3 307 aa12.52□□□□□ -0.4
NR1H3-231ENST00000529540 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 FAM157AC9JC47 383 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 MPIG6BO95866 241 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 FCGR3AP08637 254 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 CBR1P16152 277 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 LPAR6P43657 344 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 KCNJ3P48549 501 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 NPY4RP50391 375 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 TAS2R46P59540 309 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 RAB32Q13637 225 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 OR1F12Q8NHA8 337 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 CMSS1Q9BQ75 279 aaKnown RBP12.51□□□□□ -0.41
NR1H3-231ENST00000529540 HRH4Q9H3N8 390 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 NGBQ9NPG2 151 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 PNRC2Q9NPJ4 139 aaKnown RBP12.51□□□□□ -0.41
NR1H3-231ENST00000529540 FAM96BQ9Y3D0 163 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 FREM1Q5H8C1 2179 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 NCOA6Q14686 2063 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-231ENST00000529540 SOCS1O15524 211 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 SYNGR3O43761 229 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 CA11O75493 328 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 CST4P01036 141 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 IGKV3-15P01624 115 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 S100A8P05109 93 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 SERPINA5P05154 406 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 SMIM6P0DI80 62 aa12.51□□□□□ -0.41
NR1H3-231ENST00000529540 AMY2BP19961 511 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms