RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 LRP11Q86VZ4 500 aa15.7■□□□□ 0.1
LTBP3-210ENST00000528516 C1QL4Q86Z23 238 aa15.7■□□□□ 0.1
LTBP3-210ENST00000528516 MRPL24Q96A35 216 aaKnown RBP15.7■□□□□ 0.1
LTBP3-210ENST00000528516 TM4SF19Q96DZ7 209 aa15.7■□□□□ 0.1
LTBP3-210ENST00000528516 DDA1Q9BW61 102 aa15.7■□□□□ 0.1
LTBP3-210ENST00000528516 IL17BQ9UHF5 180 aa15.7■□□□□ 0.1
LTBP3-210ENST00000528516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.69■□□□□ 0.11e-12■■■■□ 26.5
LTBP3-210ENST00000528516 HMGB3O15347 200 aaKnown RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 ARF1P84077 181 aaKnown RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 ISXQ2M1V0 245 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 LBHQ53QV2 105 aaPredicted RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 FAM166AQ6J272 317 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 LCN15Q6UWW0 184 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 ST8SIA1Q92185 356 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 SPACA9Q96E40 222 aaPredicted RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 C2orf88Q9BSF0 95 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 AK3Q9UIJ7 227 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 STRAPQ9Y3F4 350 aaKnown RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 RBFOX3A6NFN3 312 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 CYB561P49447 251 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 HLA-BQ31612 363 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 FHL5Q5TD97 284 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 ZNF808Q8N4W9 903 aaPredicted RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 SLC38A9Q8NBW4 561 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 TVP23CQ96ET8 276 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 DANCRP0C864 163 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 COX5BP10606 129 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 RAB11AP62491 216 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 RPL23AP62750 156 aaKnown RBP15.69■□□□□ 0.1
LTBP3-210ENST00000528516 UNC119Q13432 240 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 TDHQ8IZJ6 230 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 ADAM19Q9H013 955 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 CLEC1BQ9P126 229 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 HS3ST3B1Q9Y662 390 aa15.69■□□□□ 0.1
LTBP3-210ENST00000528516 FAM157AC9JC47 383 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 MSTNO14793 375 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 ONECUT2O95948 504 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 NRASP01111 189 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 GAPDHP04406 335 aaKnown RBP15.68■□□□□ 0.1
LTBP3-210ENST00000528516 SFTPCP11686 197 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 CLDN15P56746 228 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 AKIRIN1Q9H9L7 192 aaPredicted RBP15.68■□□□□ 0.1
LTBP3-210ENST00000528516 OCIAD1Q9NX40 245 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 HSF4Q9ULV5 492 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 WSB1Q9Y6I7 421 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 SSSCA1O60232 199 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 IGHV3-13P01766 116 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 IGHV3-7P01780 117 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 GABRA2P47869 451 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.68■□□□□ 0.1
LTBP3-210ENST00000528516 PPP1R3CQ9UQK1 317 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 SZT2Q5T011 3432 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 FANCMQ8IYD8 2048 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 IGKV1D-42A0A075B6H8 117 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 LILRA5A6NI73 299 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 E5RGE8 158 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 SCGB1D1O95968 90 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 ERVFRD-1P60508 538 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 ZNF705AQ6ZN79 300 aaPredicted RBP15.68■□□□□ 0.1
LTBP3-210ENST00000528516 CXorf67Q86X51 503 aaPredicted RBP15.68■□□□□ 0.1
LTBP3-210ENST00000528516 CATSPERDQ86XM0 798 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 CYB561D1Q8N8Q1 229 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 OR8B12Q8NGG6 310 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 MRPL37Q9BZE1 423 aaKnown RBP15.68■□□□□ 0.1
LTBP3-210ENST00000528516 TP53TG5Q9Y2B4 290 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 NSG2Q9Y328 171 aa15.68■□□□□ 0.1
LTBP3-210ENST00000528516 LOC102725191A0A1B0GVB3 256 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 HSPB2A8KAH6 182 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 MLF1P58340 268 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 HSPB2Q16082 182 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 COL13A1Q5TAT6 717 aaPredicted RBP15.67■□□□□ 0.1
LTBP3-210ENST00000528516 KDF1Q8NAX2 398 aaPredicted RBP15.67■□□□□ 0.1
LTBP3-210ENST00000528516 NECAP1Q8NC96 275 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 SNIP1Q8TAD8 396 aaKnown RBP15.67■□□□□ 0.1
LTBP3-210ENST00000528516 M1APQ8TC57 530 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 MVB12AQ96EY5 273 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 GPR87Q9BY21 358 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 A6NCN8 305 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 DFFBO76075 338 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 SEC11BP0C7V7 166 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 NUTF2P61970 127 aaKnown RBP15.67■□□□□ 0.1
LTBP3-210ENST00000528516 ELOBQ15370 118 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 DCAF12Q5T6F0 453 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 OR13G1Q8NGZ3 307 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 EMG1Q92979 244 aaKnown RBP15.67■□□□□ 0.1
LTBP3-210ENST00000528516 OXGR1Q96P68 337 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 KCNIP1Q9NZI2 227 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 SHBQ15464 509 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 CABLES2Q9BTV7 478 aa15.67■□□□□ 0.1
LTBP3-210ENST00000528516 MTCL1Q9Y4B5 1905 aaKnown RBP15.67■□□□□ 0.1
LTBP3-210ENST00000528516 LOC101059948A0A1B0GTJ6 334 aa15.66■□□□□ 0.1
LTBP3-210ENST00000528516 IAPPP10997 89 aa15.66■□□□□ 0.1
LTBP3-210ENST00000528516 SUPT4H1P63272 117 aaKnown RBP15.66■□□□□ 0.1
LTBP3-210ENST00000528516 MRPL49Q13405 166 aaKnown RBP15.66■□□□□ 0.1
LTBP3-210ENST00000528516 SLC10A1Q14973 349 aa15.66■□□□□ 0.1
LTBP3-210ENST00000528516 EREGO14944 169 aa15.66■□□□□ 0.1
LTBP3-210ENST00000528516 CLDN1O95832 211 aa15.66■□□□□ 0.1
LTBP3-210ENST00000528516 HIST1H1DP16402 221 aaKnown RBP15.66■□□□□ 0.1
LTBP3-210ENST00000528516 GALNSP34059 522 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms