RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TNFAIP8L1Q8WVP5 186 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 TFAP2CQ92754 450 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 GHSRQ92847 366 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 CITED1Q99966 193 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 GAL3ST2Q9H3Q3 398 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 TAS2R3Q9NYW6 316 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 SLC33A1O00400 549 aaPredicted RBP26.77■■□□□ 1.88
SSSCA1-205ENST00000527920 DEGS1O15121 323 aa26.77■■□□□ 1.88
SSSCA1-205ENST00000527920 YIF1BQ5BJH7 314 aa26.77■■□□□ 1.88
SSSCA1-205ENST00000527920 LHFPL4Q7Z7J7 247 aa26.77■■□□□ 1.88
SSSCA1-205ENST00000527920 PPA2Q9H2U2 334 aa26.77■■□□□ 1.88
SSSCA1-205ENST00000527920 XPNPEP2O43895 674 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 IL13RA2Q14627 380 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 TRAPPC6BQ86SZ2 158 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 SATL1Q86VE3 508 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 PGLYRP3Q96LB9 341 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 CDCA4Q9BXL8 241 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 TMEM133Q9H2Q1 129 aa26.76■■□□□ 1.87
SSSCA1-205ENST00000527920 IGHV2-26A0A0B4J1V2 119 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 GPX5O75715 221 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 Q499Y3 187 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 MINOS1Q5TGZ0 78 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 HEPN1Q6WQI6 88 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 PIFOQ8TCI5 191 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 IL36GQ9NZH8 169 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 MINOS1-NBL1R4GNA1 71 aa26.75■■□□□ 1.87
SSSCA1-205ENST00000527920 TRRAPQ9Y4A5 3859 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 ODAMA1E959 279 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 IGFBP3P17936 291 aaPredicted RBP26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 PTGFRP43088 359 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 GLIPR1P48060 266 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 RPS11P62280 158 aaKnown RBP eCLIP26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 SCN1BQ07699 218 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 AESQ08117 197 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 OR52W1Q6IF63 320 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 BRICD5Q6PL45 260 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 STX19Q8N4C7 294 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 COQ2Q96H96 371 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 CLEC7AQ9BXN2 247 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 NCOR1P1Q9H4R4 102 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 FKBP14Q9NWM8 211 aa26.74■■□□□ 1.87
SSSCA1-205ENST00000527920 CD1AP06126 327 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 BDKRB2P30411 391 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 DYNLT3P51808 116 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 SLC34A1Q06495 639 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 RIPK1Q13546 671 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 RSU1Q15404 277 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 LDLRAD2Q5SZI1 272 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 DDI2Q5TDH0 399 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 AHSA2Q719I0 299 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 DYNAPQ8N1N2 210 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 FAM192AQ9GZU8 254 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 RANBP3Q9H6Z4 567 aaPredicted RBP26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 FBLN5Q9UBX5 448 aa26.73■■□□□ 1.87
SSSCA1-205ENST00000527920 H0YJX3 145 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 FSTP19883 344 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 PAX6P26367 422 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 ZNF93P35789 620 aaPredicted RBP26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 PAX5Q02548 391 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 DYNC1I2Q13409 638 aaKnown RBP26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 NHLRC3Q5JS37 347 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 KRBOX4Q5JUW0 171 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 BPIFB6Q8NFQ5 453 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 OR13C5Q8NGS8 318 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 OR6C3Q9NZP0 311 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 CKLFQ9UBR5 152 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 PKD1L1Q8TDX9 2849 aa26.72■■□□□ 1.87
SSSCA1-205ENST00000527920 C21orf33P30042 268 aaPredicted RBP26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 OR3A4PP47883 348 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 KCNJ3P48549 501 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 WNT4P56705 351 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 SRSF4Q08170 494 aaKnown RBP26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 LY6EQ16553 131 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 SLC35E4Q6ICL7 350 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 RTN4RL2Q86UN3 420 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 DTX3Q8N9I9 347 aa26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 PAK1IP1Q9NWT1 392 aaPredicted RBP26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 NKX1-2Q9UD57 310 aaPredicted RBP26.71■■□□□ 1.87
SSSCA1-205ENST00000527920 TRBV5-7A0A0A0MS05 114 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 MYL12BO14950 172 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 MMP23AO75900 390 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 SSX2Q16385 188 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 RNLSQ5VYX0 342 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 ZFP41Q8N8Y5 198 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 OR4C13Q8NGP0 309 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 NR1H4Q96RI1 486 aaPredicted RBP26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 METTL9Q9H1A3 318 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 IFT22Q9H7X7 185 aa26.7■■□□□ 1.86
SSSCA1-205ENST00000527920 TRAV24A0A0B4J272 114 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 CDK2P24941 298 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 CD34P28906 385 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 GABRA5P31644 462 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 KIR2DS4P43632 304 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 KRTAP10-3P60369 221 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 ATXN7L3Q14CW9 347 aaPredicted RBP26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 PAN3Q58A45 887 aaKnown RBP26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 C11orf88Q6PI97 169 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 NANOGP1Q8N7R0 232 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 ABCB10Q9NRK6 738 aa26.69■■□□□ 1.86
SSSCA1-205ENST00000527920 TCF19Q9Y242 345 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms