RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 TDGF1P3P51864 188 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 AP3S2P59780 193 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 GRB2P62993 217 aaKnown RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 HIST1H3AP68431 136 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 BLOC1S1P78537 153 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 HOXA4Q00056 320 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 PSG4Q00888 419 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 PMPCAQ10713 525 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 RAB35Q15286 201 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 GUSBP1Q15486 140 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 RSPO1Q2MKA7 263 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 PABPC1L2AQ5JQF8 200 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ELFN2Q5R3F8 820 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 HIST2H3PS2Q5TEC6 136 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 FAM27BQ5VT28 67 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 MALRD1Q5VYJ5 2156 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 NSUN5P2Q63ZY6 315 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 NCR3LG1Q68D85 454 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ZNF324BQ6AW86 544 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 RTL6Q6ICC9 239 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ASPHD2Q6ICH7 369 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 TET2Q6N021 2002 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 ZNF544Q6NX49 715 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 SFXN4Q6P4A7 337 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 PAMR1Q6UXH9 720 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 TFAP2EQ6VUC0 442 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 STAC2Q6ZMT1 411 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 IDO2Q6ZQW0 420 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 HIST2H3AQ71DI3 136 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ABHD12BQ7Z5M8 362 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 HAPLN4Q86UW8 402 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 COMMD2Q86X83 199 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ZNF433Q8N7K0 673 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 OR1J2Q8NGS2 313 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 OR5H6Q8NGV6 325 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 OR1F12Q8NHA8 337 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 OR51E1Q8TCB6 317 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 HAVCR2Q8TDQ0 301 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 GPR148Q8TDV2 347 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 SNAPC3Q92966 411 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 TMEM106AQ96A25 262 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 S100PBPQ96BU1 408 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 BSCL2Q96G97 398 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 ZNF799Q96GE5 643 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 GMPPAQ96IJ6 420 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 ASCL2Q99929 193 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 SLC30A2Q9BRI3 323 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 MED18Q9BUE0 208 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 TM2D2Q9BX73 214 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 KRTAP3-1Q9BYR8 98 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 OR2H1Q9GZK4 316 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 MIXL1Q9H2W2 232 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 RNF121Q9H920 327 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 CHMP1AQ9HD42 196 aaPredicted RBP3.57□□□□□ -1.84
CD44-226ENST00000527889 ABCB9Q9NP78 766 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 GPR84Q9NQS5 396 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ASF1BQ9NVP2 202 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 CLEC5AQ9NY25 188 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ZNF224Q9NZL3 707 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 ZNF319Q9P2F9 582 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 COMMD3Q9UBI1 195 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 NAGKQ9UJ70 344 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 HHLA2Q9UM44 414 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 FAM215AQ9Y5M1 114 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 PEX16Q9Y5Y5 336 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 A3GALT2U3KPV4 340 aa3.57□□□□□ -1.84
CD44-226ENST00000527889 JMJD1CQ15652 2540 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 PLXNB1O43157 2135 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 A0A1B0GTI1 187 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 A0A1B0GVI7 797 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 CLDN25C9JDP6 229 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 RPL36A-HNRNPH2H7BZ11 118 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 ABCD4O14678 606 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 HSPA12AO43301 675 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 SYT7O43581 403 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 WDR1O75083 606 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 RAD51DO75771 328 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 TNFSF13O75888 250 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 ARL6IP5O75915 188 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 TOXO94900 526 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 APOC1P02654 83 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 LCATP04180 440 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 CD3GP09693 182 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 UBCP0CG48 685 aaKnown RBP3.56□□□□□ -1.84
CD44-226ENST00000527889 CD79AP11912 226 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 CCL2P13500 99 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 CRYGSP22914 178 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 IGHV1-2P23083 117 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 TUBG1P23258 451 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 AZGP1P25311 298 aaKnown RBP3.56□□□□□ -1.84
CD44-226ENST00000527889 MPGP29372 298 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 OTX1P32242 354 aaPredicted RBP3.56□□□□□ -1.84
CD44-226ENST00000527889 DCTDP32321 178 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 TNFSF8P32971 234 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 CLDN12P56749 244 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 UBE2G2P60604 165 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 PCBD1P61457 104 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 SPOCK1Q08629 439 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 ZNF846Q147U1 533 aa3.56□□□□□ -1.84
CD44-226ENST00000527889 P2RY14Q15391 338 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms