RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 LPAR3Q9UBY5 353 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 SIRPB1O00241 398 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 GEMIN2O14893 280 aaKnown RBP17.15■□□□□ 0.34
CD44-222ENST00000526025 GABRR1P24046 479 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 OR3A1P47881 315 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 UNC119Q13432 240 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 SLC16A12Q6ZSM3 486 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 KIR3DL3Q8N743 410 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 TMEM59Q9BXS4 323 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 TMPRSS13Q9BYE2 586 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 RNF167Q9H6Y7 350 aa17.15■□□□□ 0.34
CD44-222ENST00000526025 RCC2Q9P258 522 aaKnown RBP17.15■□□□□ 0.34
CD44-222ENST00000526025 NAV3Q8IVL0 2385 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 TRAV24A0A0B4J272 114 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 FUOMA2VDF0 154 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 LDLRAD4O15165 306 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 OR7C1O76099 320 aaPredicted RBP17.14■□□□□ 0.33
CD44-222ENST00000526025 IL1AP01583 271 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 GLAP06280 429 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 RPS27AP62979 156 aaKnown RBP17.14■□□□□ 0.33
CD44-222ENST00000526025 MEF2CQ06413 473 aaPredicted RBP17.14■□□□□ 0.33
CD44-222ENST00000526025 P2RY14Q15391 338 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 GRK1Q15835 563 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 CR1LQ2VPA4 569 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 HES5Q5TA89 166 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 SFXN4Q6P4A7 337 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 GDPD3Q7L5L3 318 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 CROCCP3Q8IVE0 287 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 OR4S1Q8NGB4 309 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 H1FXQ92522 213 aaKnown RBP17.14■□□□□ 0.33
CD44-222ENST00000526025 BCL7BQ9BQE9 202 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 MRI1Q9BV20 369 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 SELENOIQ9C0D9 397 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 NCOR1P1Q9H4R4 102 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 BANF2Q9H503 90 aa17.14■□□□□ 0.33
CD44-222ENST00000526025 ANK3Q12955 4377 aaKnown RBP17.13■□□□□ 0.33
CD44-222ENST00000526025 FN1P02751 2386 aaKnown RBP17.13■□□□□ 0.33
CD44-222ENST00000526025 A0A1W2PPH5 198 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 MPIG6BO95866 241 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 HNF1AP20823 631 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 SCAND1P57086 179 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 RPL31P62899 125 aaKnown RBP17.13■□□□□ 0.33
CD44-222ENST00000526025 SCN1BQ07699 218 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 FAM189A2Q15884 450 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 TAF9Q16594 264 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 PAN3Q58A45 887 aaKnown RBP17.13■□□□□ 0.33
CD44-222ENST00000526025 FAHD2BQ6P2I3 314 aaPredicted RBP17.13■□□□□ 0.33
CD44-222ENST00000526025 C1orf122Q6ZSJ8 110 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 OR51D1Q8NGF3 324 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 PTX4Q96A99 478 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 FAHD2AQ96GK7 314 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 URM1Q9BTM9 101 aaKnown RBP17.13■□□□□ 0.33
CD44-222ENST00000526025 C7orf69Q9H7B7 122 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 LIN7BQ9HAP6 207 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 KPTNQ9Y664 436 aa17.13■□□□□ 0.33
CD44-222ENST00000526025 P2RX3P56373 397 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 CLDN12P56749 244 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 CTF1Q16619 201 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 C2orf76Q3KRA6 126 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 OR10K2Q6IF99 312 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 FAM89BQ8N5H3 189 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 FAM46BQ96A09 425 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 DPCDQ9BVM2 203 aaPredicted RBP17.12■□□□□ 0.33
CD44-222ENST00000526025 CHST6Q9GZX3 395 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 PPA2Q9H2U2 334 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 C19orf12Q9NSK7 152 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 OPN4Q9UHM6 478 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 CDC42EP3Q9UKI2 254 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 RAB22AQ9UL26 194 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 AUP1Q9Y679 476 aa17.12■□□□□ 0.33
CD44-222ENST00000526025 M0R1W7 72 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 RAB6AP20340 208 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 LSM3P62310 102 aaKnown RBP17.11■□□□□ 0.33
CD44-222ENST00000526025 MXD1Q05195 221 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 FAM120AOSQ5T036 256 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 GPR107Q5VW38 600 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 LURAP1LQ8IV03 231 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 CMTM4Q8IZR5 234 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 SUMF2Q8NBJ7 301 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 KIAA2026Q5HYC2 2103 aa17.11■□□□□ 0.33
CD44-222ENST00000526025 TMEM272A0A1B0GTI8 110 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 A0A1W2PQ09 198 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 hADV38S2A0JD32 116 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 PDCD6O75340 191 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 CLEC2LP0C7M8 214 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 FUT3P21217 361 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 TMBIM6P55061 237 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 EDDM3BP56851 147 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 NCS1P62166 190 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 RBM39Q14498 530 aaKnown RBP17.1■□□□□ 0.33
CD44-222ENST00000526025 PDCD1Q15116 288 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 Q71RC1 249 aaPredicted RBP17.1■□□□□ 0.33
CD44-222ENST00000526025 RAB2BQ8WUD1 216 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 UPRTQ96BW1 309 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 BARHL1Q9BZE3 327 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 SIRPDQ9H106 197 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 LPAR5Q9H1C0 372 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 KCNK15Q9H427 330 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 LINC00312Q9Y6C7 94 aa17.1■□□□□ 0.33
CD44-222ENST00000526025 SMIM30A4D0T7 59 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms