RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	ZNF672	Q499Z4	452 aa	Predicted RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	GAGE2E	Q4V326	116 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	SPIN4	Q56A73	249 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	SOHLH1	Q5JUK2	328 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	SPANXN4	Q5MJ08	99 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR2T5	Q6IEZ7	315 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	GAGE2A	Q6NT46	116 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	NOXRED1	Q6NXP6	359 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	FAHD1	Q6P587	224 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	LEG1	Q6P5S2	330 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	DNM1P34	Q6PK57	102 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC16A12	Q6ZSM3	486 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	LYG2	Q86SG7	212 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	WDFY1	Q8IWB7	410 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC30A8	Q8IWU4	369 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	MMD2	Q8IY49	270 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	LINC01555	Q8NAE3	123 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	NOXO1	Q8NFA2	376 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR2T29	Q8NH02	315 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	RNASE11	Q8TAA1	199 aa	Known RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	PIGX	Q8TBF5	258 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	GATAD1	Q8WUU5	269 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	APH1B	Q8WW43	257 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	TRUB1	Q8WWH5	349 aa	Known RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	TSLP	Q969D9	159 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	MARC2	Q969Z3	335 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	RPE	Q96AT9	228 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	STARD4	Q96DR4	205 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	SGTB	Q96EQ0	304 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF385A	Q96PM9	386 aa	Known RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	TM2D2	Q9BX73	214 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	CCDC90B	Q9GZT6	254 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	GABARAPL1	Q9H0R8	117 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	REEP1	Q9H902	201 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	PROK2	Q9HC23	129 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	HMG20A	Q9NP66	347 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	IL1RAP	Q9NPH3	570 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	TECR	Q9NZ01	308 aa	Known RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	RCC2	Q9P258	522 aa	Known RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	B3GAT1	Q9P2W7	334 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	GAGE2D	Q9UEU5	116 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	BTNL2	Q9UIR0	455 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF223	Q9UK11	482 aa	Predicted RBP	4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	PSG11	Q9UQ72	335 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	PRSS21	Q9Y6M0	314 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	COLEC10	Q9Y6Z7	277 aa		4.26	□□□□□ -1.73
PABPC1-223	ENST00000523636	TRBV5-3	A0A0A0MS03	114 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636		A0A1B0GVI7	797 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636		A6NIZ1	184 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636		K7EN84	100 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SIRPB1	O00241	398 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	UPK1A	O00322	258 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SULT1C2	O00338	296 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	TNFSF11	O14788	317 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC31A2	O15432	143 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	MPZL2	O60487	215 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	CPSF4	O95639	269 aa	Known RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF682	O95780	498 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	CD5	P06127	495 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	NBEAP1	P0C6P0	100 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	CHAT	P28329	748 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	CCR7	P32248	378 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	RPL13A	P40429	203 aa	Known RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	GLIPR1	P48060	266 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	GZMM	P51124	257 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	CD81	P60033	236 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ISL1	P61371	349 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	IL5RA	Q01344	420 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF45	Q02386	682 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	KRR1	Q13601	381 aa	Known RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	NDUFA9	Q16795	377 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	RPEL1	Q2QD12	228 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	PDSS1	Q5T2R2	415 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	PXDC1	Q5TGL8	231 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	DMKN	Q6E0U4	476 aa	Predicted RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	TRIM40	Q6P9F5	258 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	TBPL2	Q6SJ96	375 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	DRAM2	Q6UX65	266 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	NPSR1	Q6W5P4	371 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	RBMS3	Q6XE24	437 aa	Known RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF66	Q6ZN08	573 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	DPY19L2P2	Q6ZN68	376 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	LINC00336	Q6ZUF6	198 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ACOT7L	Q6ZUV0	252 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	PRSS41	Q7RTY9	318 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	THOC6	Q86W42	341 aa	Known RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	KRTCAP2	Q8N6L1	136 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SCCPDH	Q8NBX0	429 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	LFNG	Q8NES3	379 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	KBTBD8	Q8NFY9	601 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR7A2P	Q8NGA2	310 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR4K1	Q8NGD4	311 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR10A7	Q8NGE5	316 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR10V1	Q8NGI7	309 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	MRGPRD	Q8TDS7	321 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	CREB3L1	Q96BA8	519 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	YIPF6	Q96EC8	236 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF486	Q96H40	463 aa	Predicted RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SEC22C	Q9BRL7	303 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	EFCAB11	Q9BUY7	163 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms