RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 LINC01356Q8N9X3 169 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 SDSLQ96GA7 329 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 C6orf62Q9GZU0 229 aaPredicted RBP9.92□□□□□ -0.82
PVT1-215ENST00000522963 DNTTIP1Q9H147 329 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 ATG5Q9H1Y0 275 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 ABCG5Q9H222 651 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 ZNF665Q9H7R5 613 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 IFT22Q9H7X7 185 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 KAAG1Q9UBP8 84 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 KCNS2Q9ULS6 477 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 A3GALT2U3KPV4 340 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 DOCK11Q5JSL3 2073 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 TMEM82A0PJX8 343 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 METTL21EPA6NDL7 271 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A10PA6NDY2 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A18PA6NE21 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A16PA6NEW6 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A20PA6NIJ5 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 NKX6-3A6NJ46 265 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A8PA6NJQ4 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A7PA6NKC0 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A22PA8MWA6 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A12PA8MX19 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A5PA8MXJ8 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A23PA8MXZ1 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 F5H0A9 414 aaPredicted RBP9.91□□□□□ -0.82
PVT1-215ENST00000522963 RAB27BO00194 218 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 SLC33A1O00400 549 aaPredicted RBP9.91□□□□□ -0.82
PVT1-215ENST00000522963 TMPRSS2O15393 492 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 RGS5O15539 181 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 PSPNO60542 156 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 PDCD6O75340 191 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 ZNF737O75373 536 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FCN3O75636 299 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A15PP0C7V4 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A13PP0C7W8 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A14PP0C7W9 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 FAM90A24PP0C7X0 464 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 ELK1P19419 428 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 LMO1P25800 156 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 BLVRBP30043 206 aaPredicted RBP9.91□□□□□ -0.82
PVT1-215ENST00000522963 TMEM50BP56557 158 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 RIPPLY3P57055 190 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 LMO4P61968 165 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 BRICD5Q6PL45 260 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 C17orf107Q6ZR85 190 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 LAX1Q8IWV1 398 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 ZNRF1Q8ND25 227 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 OR56B1Q8NGI3 324 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 RAB39BQ96DA2 213 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 CMTM3Q96MX0 182 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 MMP27Q9H306 513 aa9.91□□□□□ -0.82
PVT1-215ENST00000522963 PATZ1Q9HBE1 687 aaKnown RBP9.91□□□□□ -0.82
PVT1-215ENST00000522963 RCC2Q9P258 522 aaKnown RBP9.91□□□□□ -0.82
PVT1-215ENST00000522963 B4DSR2 109 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 HSPB6O14558 160 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 IGHV2-5P01817 119 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 APOA1P02647 267 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 WNT2P09544 360 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 RPS2P15880 293 aaKnown RBP9.9□□□□□ -0.82
PVT1-215ENST00000522963 FUT3P21217 361 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 CDK2P24941 298 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 CHATP28329 748 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 OR3A1P47881 315 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 SEC61A1P61619 476 aaKnown RBP9.9□□□□□ -0.82
PVT1-215ENST00000522963 IL13RA1P78552 427 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 FAM189A2Q15884 450 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 PAN3Q58A45 887 aaKnown RBP9.9□□□□□ -0.82
PVT1-215ENST00000522963 PLAC9Q5JTB6 97 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 NKAPLQ5M9Q1 402 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 ATAD3CQ5T2N8 411 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 RAB12Q6IQ22 244 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 ZNF841Q6ZN19 808 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 IL17RELQ6ZVW7 336 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 SLC36A1Q7Z2H8 476 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 FGFRL1Q8N441 504 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 BPIFB2Q8N4F0 458 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 ZNF561Q8N587 486 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 DTX3Q8N9I9 347 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 ASCC1Q8N9N2 400 aaKnown RBP9.9□□□□□ -0.82
PVT1-215ENST00000522963 SUMF2Q8NBJ7 301 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 CHST4Q8NCG5 386 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 OR4S1Q8NGB4 309 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 OR10R2Q8NGX6 335 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 MED30Q96HR3 178 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 SNX22Q96L94 193 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 NEDD4LQ96PU5 975 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 CHST6Q9GZX3 395 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 SHARPINQ9H0F6 387 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 PTTG2Q9NZH5 202 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 MIOXQ9UGB7 285 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 PEX16Q9Y5Y5 336 aa9.9□□□□□ -0.82
PVT1-215ENST00000522963 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
PVT1-215ENST00000522963 FAM25AB3EWG3 89 aa9.89□□□□□ -0.83
PVT1-215ENST00000522963 FAM25CB3EWG5 89 aa9.89□□□□□ -0.83
PVT1-215ENST00000522963 FAM25GB3EWG6 89 aa9.89□□□□□ -0.83
PVT1-215ENST00000522963 K7N7A8 449 aa9.89□□□□□ -0.83
PVT1-215ENST00000522963 CLPXO76031 633 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms