RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 OCM2P0CE71 109 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 OCMP0CE72 109 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-204ENST00000521331 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 CALCBP10092 127 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF20P17024 532 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 ATF1P18846 271 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 LMO1P25800 156 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 SLC6A1P30531 599 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 ATP6V1E1P36543 226 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 GLIPR1P48060 266 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 GTF2A1P52655 376 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-204ENST00000521331 AESQ08117 197 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 TMEM244Q5VVB8 128 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 THNSL2Q86YJ6 484 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 ADAT3Q96EY9 351 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF649Q9BS31 505 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 COMMD4Q9H0A8 199 aa11.82□□□□□ -0.52
PRKDC-204ENST00000521331 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 G3V2T6 193 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 GYG2O15488 501 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 KDM4BO94953 1096 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF44P15621 663 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 GDNFP39905 211 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 KIR3DL2P43630 455 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 OR3A4PP47883 348 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 THBS3P49746 956 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 ISL1P61371 349 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
PRKDC-204ENST00000521331 TMED1Q13445 227 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 RBM39Q14498 530 aaKnown RBP11.81□□□□□ -0.52
PRKDC-204ENST00000521331 KRBOX4Q5JUW0 171 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 KDM4DQ6B0I6 523 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 RDH10Q8IZV5 341 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 CHPT1Q8WUD6 406 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 RPEQ96AT9 228 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 FGGYQ96C11 551 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 GNG8Q9UK08 70 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 POMPQ9Y244 141 aa11.81□□□□□ -0.52
PRKDC-204ENST00000521331 AMMECR1Q9Y4X0 333 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF729A6NN14 1252 aaPredicted RBP11.8□□□□□ -0.52
PRKDC-204ENST00000521331 APOL3O95236 402 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 UNQ9370/PRO34162Q6UXP9 181 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 OR2W3Q7Z3T1 314 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 ZDHHC13Q8IUH4 622 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 OR2G2Q8NGZ5 317 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 OR9G1Q8NH87 305 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 RFKQ969G6 155 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 TOMM40LQ969M1 308 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 MBOAT4Q96T53 435 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 GABARAPL1Q9H0R8 117 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
PRKDC-204ENST00000521331 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 KBTBD11-OT1A0A1B0GTJ5 212 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 MT-ND2P03891 347 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 ISG15P05161 165 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 MYCNOSP40205 109 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 SCN1BQ07699 218 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 ATP6AP1Q15904 470 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 TP53I3Q53FA7 332 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF329Q86UD4 541 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 SAXO1Q8IYX7 474 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 COMMD1Q8N668 190 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 OR8J1Q8NGP2 316 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 RFT1Q96AA3 541 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 COQ2Q96H96 371 aa11.79□□□□□ -0.52
PRKDC-204ENST00000521331 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 NUDT19A8MXV4 375 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
PRKDC-204ENST00000521331 DEGS1O15121 323 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 FGF16O43320 207 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 SNRNP70P08621 437 aaKnown RBP11.78□□□□□ -0.52
PRKDC-204ENST00000521331 NHLRC4P0CG21 123 aaPredicted RBP11.78□□□□□ -0.52
PRKDC-204ENST00000521331 NFYBP25208 207 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 GP2P55259 537 aaKnown RBP11.78□□□□□ -0.52
PRKDC-204ENST00000521331 SLC35B1P78383 322 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF85Q03923 595 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 BNIP1Q12981 228 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 Q6P435 159 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 C8orf86Q6ZUL3 223 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 ZNF565Q8N9K5 539 aa11.78□□□□□ -0.52
PRKDC-204ENST00000521331 OR56B4Q8NH76 319 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms