RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 CDK5Q00535 292 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 ZNF235Q14590 738 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 KIR2DS1Q14954 304 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 PDK2Q15119 407 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 QPRTQ15274 297 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 GABRA6Q16445 453 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 KRTAP13-2Q52LG2 175 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 RNASE13Q5GAN3 156 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 C22orf39Q6P5X5 142 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 ZNF880Q6PDB4 577 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 SETD3Q86TU7 594 aaPredicted RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 CALHM1Q8IU99 346 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 KATNAL2Q8IYT4 538 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 SYCE1Q8N0S2 351 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 UBL4BQ8N7F7 174 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 NECAP1Q8NC96 275 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 BPIFCQ8NFQ6 507 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 ACTL9Q8TC94 416 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 RGP1Q92546 391 aaPredicted RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 MSANTD3Q96H12 275 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 RNF157Q96PX1 679 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 TIMM29Q9BSF4 260 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 GGTLC1Q9BX51 225 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 SLIRPQ9GZT3 109 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 MRPS30Q9NP92 439 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 PRSS16Q9NQE7 514 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 RBM22Q9NW64 420 aaKnown RBP eCLIP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 FBXL12Q9NXK8 326 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 OR51B4Q9Y5P0 310 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 TLN2Q9Y4G6 2542 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 CENPEQ02224 2701 aa2.47□□□□□ -2.01
CTNNA1-222ENST00000520400 NBASA2RRP1 2371 aa2.46□□□□□ -2.01
CTNNA1-222ENST00000520400 DYSFO75923 2080 aa2.46□□□□□ -2.01
CTNNA1-222ENST00000520400 GABRR3A8MPY1 467 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 BTNL10A8MVZ5 291 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 KRBOX1C9JBD0 128 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 WRBO00258 174 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 SLC31A1O15431 190 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 ZMPSTE24O75844 475 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 VAMP5O95183 116 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 IFNW1P05000 195 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 PIRTP0C851 137 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 MSNP26038 577 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 CASQ1P31415 396 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 RFC3P40938 356 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 HADHBP55084 474 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 SYNJ2BPP57105 145 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 RAD51Q06609 339 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 C2orf54Q08AI8 447 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 TFDP2Q14188 446 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 NCF4Q15080 339 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 PAFAH1B3Q15102 231 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 TRIP13Q15645 432 aaPredicted RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 HNRNPA1L2Q32P51 320 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 MPV17L2Q567V2 206 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 TPTE2P1Q5T6R2 138 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 C9orf64Q5T6V5 341 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 ZFP1Q6P2D0 407 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 TTC23LQ6PF05 361 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 PID1Q7Z2X4 250 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 FAM122BQ7Z309 247 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 SLC13A5Q86YT5 568 aaPredicted RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 UMODL1-AS1Q8N2C9 162 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 RNF10Q8N5U6 811 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 ZNF645Q8N7E2 425 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 LRRC75AQ8NAA5 344 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 OR51F2Q8NH61 342 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 LINC01560Q8TB33 94 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 OR8D1Q8WZ84 308 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 CLDN23Q96B33 292 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 L3HYPDHQ96EM0 354 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 OR10C1Q96KK4 312 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 RBBP8Q99708 897 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 NAPGQ99747 312 aaPredicted RBP2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 LRRC19Q9H756 370 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 DYRK4Q9NR20 520 aa2.46□□□□□ -2.02
CTNNA1-222ENST00000520400 MGAQ8IWI9 3026 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 MED13LQ71F56 2210 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 BIRC6Q9NR09 4857 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 SPAARA0A1B0GVQ0 90 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 OR6C74A6NCV1 312 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 A8MUU9 505 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 MIF4GDA9UHW6 222 aaKnown RBP2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 GOLGA8MH3BSY2 632 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 RPL36A-HNRNPH2H7BZ11 118 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 APOC4-APOC2K7ER74 178 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 ERI3O43414 337 aaKnown RBP2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 AKR7A2O43488 359 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 SCELO95171 688 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 HLA-DQA1P01909 254 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 APOC2P02655 101 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 CD37P11049 281 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 IL32P24001 234 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 P2RY2P41231 377 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 RAB7AP51149 207 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 FABP6P51161 128 aa2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 VSX2P58304 361 aaPredicted RBP2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 ZNF121P58317 390 aaPredicted RBP2.45□□□□□ -2.02
CTNNA1-222ENST00000520400 TAS2R31P59538 309 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms