RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 IL3RAP26951 378 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 TPPP2P59282 170 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 RPS15AP62244 130 aaKnown RBP11.77□□□□□ -0.52
PABPC1-208ENST00000519004 FKBP1BP68106 108 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 ADAMTSL4Q6UY14 1074 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 SUMF1Q8NBK3 374 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 OR5L1Q8NGL2 311 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 SPACA7Q96KW9 195 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 VSTM2LQ96N03 204 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 RPRMQ9NS64 109 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 MCTS1Q9ULC4 181 aaKnown RBP11.77□□□□□ -0.52
PABPC1-208ENST00000519004 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 B3GALT1Q9Y5Z6 326 aa11.77□□□□□ -0.52
PABPC1-208ENST00000519004 ATG2AQ2TAZ0 1938 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 GALR2O43603 387 aaPredicted RBP11.77□□□□□ -0.53
PABPC1-208ENST00000519004 SSSCA1O60232 199 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF728P0DKX0 622 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 BLVRBP30043 206 aaPredicted RBP11.77□□□□□ -0.53
PABPC1-208ENST00000519004 HOXC12P31275 282 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 PAFAH1B2P68402 229 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 RPL19P84098 196 aaKnown RBP11.77□□□□□ -0.53
PABPC1-208ENST00000519004 ABCA11PQ4W5N1 156 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 PHLDA2Q53GA4 152 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 ERN2Q76MJ5 926 aaKnown RBP11.77□□□□□ -0.53
PABPC1-208ENST00000519004 D2HGDHQ8N465 521 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 OR4B1Q8NGF8 309 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 CCL26Q9Y258 94 aa11.77□□□□□ -0.53
PABPC1-208ENST00000519004 A6NCN8 305 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 NKX2-6A6NCS4 301 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 GPR89AB7ZAQ6 455 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 HRKO00198 91 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF205O95201 554 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 GPR89BP0CG08 455 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 CD226Q15762 336 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 FBXO42Q6P3S6 717 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 CBLN3Q6UW01 205 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 MRGPRGQ86SM5 289 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 WDFY1Q8IWB7 410 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF321PQ8N8H1 164 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF709Q8N972 641 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 OR2V1Q8NHB1 315 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ANAPC16Q96DE5 110 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 TM4SF19Q96DZ7 209 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 PBOV1Q9GZY1 135 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 LYRM4Q9HD34 91 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 CENPMQ9NSP4 180 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 PLA2G3Q9NZ20 509 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 PILRAQ9UKJ1 303 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ST3GAL6Q9Y274 331 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 SHISA7A6NL88 538 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 F6UZH7 168 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 TMEM50AO95807 157 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 OPN1LWP04000 364 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF20P17024 532 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 NKX2-1P43699 371 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-208ENST00000519004 LCN2P80188 198 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ZNF154Q13106 437 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 EXT1Q16394 746 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 TMEM41BQ5BJD5 291 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 AGBL4Q5VU57 503 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 Q8N976 141 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 APH1AQ96BI3 265 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 WDYHV1Q96HA8 205 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 ATP5SQ99766 215 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 HDHD3Q9BSH5 251 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-208ENST00000519004 NKX2-4Q9H2Z4 354 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 TUBG2Q9NRH3 451 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 SERGEFQ9UGK8 458 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 PCNX3Q9H6A9 2034 aa11.76□□□□□ -0.53
PABPC1-208ENST00000519004 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 A0A1W2PQ45 241 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-208ENST00000519004 A0A1W2PQY0 241 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 HYPMO75409 117 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 MRPS34P82930 218 aaKnown RBP11.75□□□□□ -0.53
PABPC1-208ENST00000519004 OCIAD2Q56VL3 154 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 TMPRSS7Q7RTY8 843 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 LHFPL4Q7Z7J7 247 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 OR5D18Q8NGL1 313 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 OR14C36Q8NHC7 312 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 NXT1Q9UKK6 140 aaKnown RBP11.75□□□□□ -0.53
PABPC1-208ENST00000519004 PRRC2BQ5JSZ5 2229 aaKnown RBP11.75□□□□□ -0.53
PABPC1-208ENST00000519004 MMP23AO75900 390 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 IGLC3P0DOY3 106 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 ESDP10768 282 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 AADACP22760 399 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 BAXQ07812 192 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 LDLRAD2Q5SZI1 272 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 FNDC7Q5VTL7 733 aa11.75□□□□□ -0.53
PABPC1-208ENST00000519004 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms