RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HENMT1Q5T8I9 393 aaKnown RBP-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 LPCAT4Q643R3 524 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 LAIR2Q6ISS4 152 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 SLC25A48Q6ZT89 311 aaKnown RBP-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 TMEM150AQ86TG1 271 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 CCDC50Q8IVM0 306 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 C17orf78Q8N4C9 275 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 TRIML2Q8N7C3 387 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 LPCAT1Q8NF37 534 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR4D5Q8NGN0 318 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 EEF2KMTQ96G04 330 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 UPK3BQ9BT76 320 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 PPA2Q9H2U2 334 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 VAT1LQ9HCJ6 419 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 KCNIP2Q9NS61 270 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 STARD10Q9Y365 291 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 ENPP4Q9Y6X5 453 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 TRGV5A0A0B4J1U4 118 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 A0A1W2PPV9 198 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 A4D1N5 150 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 PPP1R2P9O14990 202 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 FMO6PO60774 539 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 HSF2BPO75031 334 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 CLIC3O95833 236 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 UBBP0CG47 229 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 S100A2P29034 98 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 MYCNOSP40205 109 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 SSR4P51571 173 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 YWHAGP61981 247 aaKnown RBP eCLIP-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 RAB11AP62491 216 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 GABPB1Q06547 395 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 ART3Q13508 389 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 LRRC26Q2I0M4 334 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 SHQ1Q6PI26 577 aaKnown RBP-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 DGAT2L6Q6ZPD8 337 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 TRPV1Q8NER1 839 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR56A4Q8NGH8 313 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR51E1Q8TCB6 317 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 NUP58Q9BVL2 599 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 C8orf33Q9H7E9 229 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 HEBP1Q9NRV9 189 aa-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 RBBP6Q7Z6E9 1792 aaKnown RBP-3.1□□□□□ -2.91
RNU6-539P-201ENST00000516665 DHX29Q7Z478 1369 aaKnown RBP-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 TRBV30A0A0K0K1B3 111 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 A0A0U1RQV5 110 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 A0A1B0GWJ7 208 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 AP3B1O00203 1094 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 NOS1APO75052 506 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 HYPMO75409 117 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 IL1BP01584 269 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 BPGMP07738 259 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 KRT16P08779 473 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 UBE2IP63279 158 aaKnown RBP-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 PJVKQ0ZLH3 352 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 ZNF345Q14585 488 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 MPV17LQ2QL34 196 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 TMEM215Q68D42 235 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 PET117Q6UWS5 81 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 C12orf54Q6X4T0 127 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 FAM231DQ6ZW35 169 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 DAW1Q8N136 415 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 LINC00337Q8N6G1 96 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 FER1L6-AS1Q8NA97 138 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR1S2Q8NGQ3 325 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 TRMT10AQ8TBZ6 339 aaKnown RBP-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 ITFG2Q969R8 447 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 MTG1Q9BT17 334 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 TXLNGYQ9BZA5 131 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 NIPAL2Q9H841 368 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 ROPN1Q9HAT0 212 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 STRCQ7RTU9 1775 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 LAMA1P25391 3075 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 ZGRF1Q86YA3 2104 aa-3.11□□□□□ -2.91
RNU6-539P-201ENST00000516665 PGPA6NDG6 321 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 SLC9A3R1O14745 358 aaPredicted RBP-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 PGA5P0DJD9 388 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 CXCR1P25024 350 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 IMPA1P29218 277 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 DUSP3P51452 185 aaPredicted RBP-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 GCSAMLQ5JQS6 135 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 SCGB1D4Q6XE38 83 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 ZNF550Q7Z398 422 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 RNF148Q8N7C7 305 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR11H1Q8NG94 326 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR10A6Q8NH74 314 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 RAB3IL1Q8TBN0 382 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 TEAD3Q99594 435 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 FLVCR2Q9UPI3 526 aa-3.12□□□□□ -2.91
RNU6-539P-201ENST00000516665 PRKDCP78527 4128 aaKnown RBP-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 F5P12259 2224 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 SCN3AQ9NY46 2000 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 A0A0D9SEW6 157 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 LOC105371045A0A1W2PR82 267 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 SMIM9A6NGZ8 99 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 SMKR1H3BMG3 65 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 UBFD1O14562 309 aaKnown RBP-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 DYNC1I1O14576 645 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 KLF7O75840 302 aaPredicted RBP-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 OR2A4O95047 310 aa-3.13□□□□□ -2.91
RNU6-539P-201ENST00000516665 DNAL4O96015 105 aa-3.13□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms