RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 DNAJC27Q9NZQ0 273 aa0.7□□□□□ -2.3
GYPB-209ENST00000508618 ZMAT5Q9UDW3 170 aaKnown RBP0.7□□□□□ -2.3
GYPB-209ENST00000508618 OR5V1Q9UGF6 321 aa0.7□□□□□ -2.3
GYPB-209ENST00000508618 VPREB3Q9UKI3 123 aa0.7□□□□□ -2.3
GYPB-209ENST00000508618 U3KQK5 164 aa0.7□□□□□ -2.3
GYPB-209ENST00000508618 ARAP3Q8WWN8 1544 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 WDR19Q8NEZ3 1342 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 IGHV3OR15-7A0A075B7D8 119 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 GSTTP1A0A1W2PQM5 241 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 NCF1BA6NI72 391 aaPredicted RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 KNCNA6PVL3 124 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 NCF1CA8MVU1 366 aaPredicted RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 E7EWF7 191 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 PLPP3O14495 311 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 PRMT5O14744 637 aaPredicted RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 DENRO43583 198 aaKnown RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 TCF21O43680 179 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 SH2D1AO60880 128 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 GYPCP04921 128 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 GUSBP08236 651 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 P0DMU3 169 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 FAM231AP0DMU4 169 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 FAM231CP0DMU5 169 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 ZNF22P17026 224 aaPredicted RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 PSMB9P28065 219 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 DYNC1I2Q13409 638 aaKnown RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 STK38Q15208 465 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 TAL2Q16559 108 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 TMEM241Q24JQ0 296 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 HIKESHIQ53FT3 197 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 C10orf91Q5T1B1 145 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 C16orf87Q6PH81 154 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 GAPTQ8N292 157 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 ARHGAP18Q8N392 663 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 ACBD4Q8NC06 268 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 OR4C16Q8NGL9 310 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 OR2K2Q8NGT1 345 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 OR6N2Q8NGY6 317 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 C22orf15Q8WYQ4 148 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 GTF2H4Q92759 462 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 CIDECQ96AQ7 238 aaPredicted RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 DNAJC30Q96LL9 226 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 B9D2Q9BPU9 175 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 TXNDC17Q9BRA2 123 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 ANAPC13Q9BS18 74 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 SLC19A3Q9BZV2 496 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 NXF2Q9GZY0 626 aaKnown RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 ZNF286AQ9HBT8 521 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 ZNF706Q9Y5V0 76 aaPredicted RBP0.69□□□□□ -2.3
GYPB-209ENST00000508618 STRCP1A6NGW2 1772 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 PLXNA3P51805 1871 aa0.69□□□□□ -2.3
GYPB-209ENST00000508618 PHLPP2Q6ZVD8 1323 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 A0A1B0GXF2 115 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 DHRS3O75911 302 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 CD8AP01732 235 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 SLC2A1P11166 492 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 GABRA1P14867 456 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 TTPAP49638 278 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 PSG4Q00888 419 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 C2orf80Q0P641 193 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 DOC2AQ14183 400 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 WDR43Q15061 677 aaKnown RBP eCLIP0.68□□□□□ -2.3
GYPB-209ENST00000508618 ERICH5Q6P6B1 374 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 FAM58AQ8N1B3 248 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 FAM184AQ8NB25 1140 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 OR10P1Q8NGE3 313 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 OR51L1Q8NGJ5 315 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 OR6K2Q8NGY2 324 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 RNASE11Q8TAA1 199 aaKnown RBP0.68□□□□□ -2.3
GYPB-209ENST00000508618 BLNKQ8WV28 456 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 TWIST2Q8WVJ9 160 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 NELFBQ8WX92 580 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 CCL17Q92583 94 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 HIST1H2BAQ96A08 127 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 BIRC8Q96P09 236 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 PITX2Q99697 317 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 OR2AG1Q9H205 316 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 SYT4Q9H2B2 425 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 POMKQ9H5K3 350 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 VCX3AQ9NNX9 186 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 RPUSD1Q9UJJ7 312 aaKnown RBP0.68□□□□□ -2.3
GYPB-209ENST00000508618 FBXL3Q9UKT7 428 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 CCL26Q9Y258 94 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 LINC00588Q9Y4M8 146 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 HSPE1-MOB4S4R3N1 261 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 ADAMTS7Q9UKP4 1686 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 SLIT2O94813 1529 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 MIA3Q5JRA6 1907 aa0.68□□□□□ -2.3
GYPB-209ENST00000508618 KMT2EQ8IZD2 1858 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 TMEM131Q92545 1883 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 TRAV8-7A0A075B6U6 113 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 IGHV2-26A0A0B4J1V2 119 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 GOLGA6L7A0A1B0GV03 622 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 A0A1W2PPV4 95 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 A0A1W2PRG6 482 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 C19orf71A6NCJ1 209 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 A6NED7 52 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 F5H5T6 163 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 TMEM250H0YL14 139 aa0.67□□□□□ -2.3
GYPB-209ENST00000508618 KLRC4-KLRK1H3BQV0 150 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms