RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ARL8BQ9NVJ2 186 aa12.87□□□□□ -0.35
SNF8-205ENST00000507302 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
SNF8-205ENST00000507302 IGKV1-9A0A0C4DH69 117 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 SEC14L6B5MCN3 397 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 J3QR06 171 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 SNX3O60493 162 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 INMTO95050 263 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 RBP2P50120 134 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 INSL3P51460 131 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 TRIM25Q14258 630 aaKnown RBP12.86□□□□□ -0.35
SNF8-205ENST00000507302 KPNB1Q14974 876 aaKnown RBP12.86□□□□□ -0.35
SNF8-205ENST00000507302 PNLIPRP3Q17RR3 467 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 DHFR2Q86XF0 187 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 ARHGAP24Q8N264 748 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 Q8N6K4 173 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 TOMM40LQ969M1 308 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 RPEQ96AT9 228 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 NCOR1P1Q9H4R4 102 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 PLEKHA1Q9HB21 404 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 CLN6Q9NWW5 311 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 GTF2A1LQ9UNN4 478 aa12.86□□□□□ -0.35
SNF8-205ENST00000507302 AMMECR1Q9Y4X0 333 aaPredicted RBP12.86□□□□□ -0.35
SNF8-205ENST00000507302 KBTBD11-OT1A0A1B0GTJ5 212 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 AP4M1O00189 453 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 SIRPB1O00241 398 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 SH2D1BO14796 132 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 SYT7O43581 403 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 CST1P01037 141 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 ELANEP08246 267 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 TMEM11P17152 192 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 PRKACAP17612 351 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 RAB7AP51149 207 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 DIAPH2-AS1Q14236 149 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 Q6P435 159 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 LCNL1Q6ZST4 164 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
SNF8-205ENST00000507302 TGIF2LXQ8IUE1 241 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 PP6455Q8WZ26 134 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 RHOFQ9HBH0 211 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
SNF8-205ENST00000507302 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
SNF8-205ENST00000507302 IGKV1-12A0A0C4DH73 117 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 KDM4BO94953 1096 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 IGKV1D-12P01611 117 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 ANXA8P13928 327 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 GPR12P47775 334 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 ATP1B3P54709 279 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 RAB25P57735 213 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 AADACL4Q5VUY2 407 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 UTS2BQ765I0 119 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 CHST4Q8NCG5 386 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 C4orf3Q8WVX3 66 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 TEX12Q9BXU0 123 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 LIN7CQ9NUP9 197 aaKnown RBP12.84□□□□□ -0.35
SNF8-205ENST00000507302 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
SNF8-205ENST00000507302 NPIPB11E5RHQ5 1161 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.36
SNF8-205ENST00000507302 PRKYO43930 277 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 SERPINA3P01011 423 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 IGHG4P01861 327 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 PAX5Q02548 391 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 MADCAM1Q13477 382 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 GPR50Q13585 617 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 RBM39Q14498 530 aaKnown RBP12.83□□□□□ -0.36
SNF8-205ENST00000507302 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
SNF8-205ENST00000507302 SLC16A12Q6ZSM3 486 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 ADGRG5Q8IZF4 528 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 HS3ST5Q8IZT8 346 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
SNF8-205ENST00000507302 ZNF556Q9HAH1 456 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 ZNF446Q9NWS9 450 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 OR6C3Q9NZP0 311 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 NKX1-2Q9UD57 310 aaPredicted RBP12.83□□□□□ -0.36
SNF8-205ENST00000507302 PSG11Q9UQ72 335 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 GSTK1Q9Y2Q3 226 aa12.83□□□□□ -0.36
SNF8-205ENST00000507302 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 CYB5AP00167 134 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 CALCBP10092 127 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 PSMB8P28062 276 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 CRISP1P54107 249 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 ISL1P61371 349 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 ZNF816Q0VGE8 651 aaPredicted RBP12.82□□□□□ -0.36
SNF8-205ENST00000507302 HES1Q14469 280 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 ZNF260Q3ZCT1 412 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 KRBOX4Q5JUW0 171 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 ASPHD1Q5U4P2 390 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 NXNL2Q5VZ03 156 aa12.82□□□□□ -0.36
SNF8-205ENST00000507302 BCDIN3DQ7Z5W3 292 aaKnown RBP12.82□□□□□ -0.36
SNF8-205ENST00000507302 IZUMO1Q8IYV9 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms