RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 HOXD4P09016 255 aaPredicted RBP10.29□□□□□ -0.76
NUP54-202ENST00000502850 BCL3P20749 454 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 DUSP1P28562 367 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 GPM6AP51674 278 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 PRSS12P56730 875 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 FXYD4P59646 89 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 GNG3P63215 75 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 TGFBR3Q03167 851 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 TBC1D28Q2M2D7 210 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.29□□□□□ -0.76
NUP54-202ENST00000502850 SPERTQ8NA61 448 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 HPSE2Q8WWQ2 592 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 SLAMF9Q96A28 289 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 WDYHV1Q96HA8 205 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 GMPPAQ96IJ6 420 aaPredicted RBP10.29□□□□□ -0.76
NUP54-202ENST00000502850 DMRTA2Q96SC8 542 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 SPIN2AQ99865 258 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 SPIN2BQ9BPZ2 258 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 ZDHHC11Q9H8X9 412 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 ASF1BQ9NVP2 202 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 PRR13Q9NZ81 148 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 PCDHB10Q9UN67 800 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 ARGFXA6NJG6 315 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 SCO1O75880 301 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 NAPSAO96009 420 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 PPYP01298 95 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 OR5AC1P0C628 307 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 HKR1P10072 659 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 S100GP29377 79 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
NUP54-202ENST00000502850 RND3P61587 244 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 IL24Q13007 206 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 GPR157Q5UAW9 335 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 P4HA3Q7Z4N8 544 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 ZNF565Q8N9K5 539 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 OR5T2Q8NGG2 359 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 OR5P3Q8WZ94 311 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 BCL2L2Q92843 193 aaPredicted RBP10.29□□□□□ -0.76
NUP54-202ENST00000502850 MARS2Q96GW9 593 aaKnown RBP10.29□□□□□ -0.76
NUP54-202ENST00000502850 CYYR1Q96J86 154 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 C1QTNF6Q9BXI9 259 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 Q9N2K0 584 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 MMP26Q9NRE1 261 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 TRBV6-6A0A0A6YYG2 114 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 MSGN1A6NI15 193 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 CDS2O95674 445 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 AADACP22760 399 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 NPBWR2P48146 333 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 Q8IYB0 196 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 TMED6Q8WW62 240 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 DYRK2Q92630 601 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
NUP54-202ENST00000502850 ABHD14BQ96IU4 210 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 C18orf12Q96KH6 178 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 LIME1Q9H400 295 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 IFT22Q9H7X7 185 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 TAF9BQ9HBM6 251 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 LPAR3Q9UBY5 353 aa10.28□□□□□ -0.76
NUP54-202ENST00000502850 CNTRLQ7Z7A1 2325 aa10.27□□□□□ -0.76
NUP54-202ENST00000502850 BORCS7-ASMTA0A0B4J1R7 106 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 TRDCB7Z8K6 153 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 LGALS8O00214 317 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 CNOT4O95628 575 aaKnown RBP10.27□□□□□ -0.77
NUP54-202ENST00000502850 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
NUP54-202ENST00000502850 IL32P24001 234 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 MDH2P40926 338 aaKnown RBP10.27□□□□□ -0.77
NUP54-202ENST00000502850 PHLDA2Q53GA4 152 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 MOB1BQ7L9L4 216 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 OR1S2Q8NGQ3 325 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 NEK7Q8TDX7 302 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 NARS2Q96I59 477 aaKnown RBP10.27□□□□□ -0.77
NUP54-202ENST00000502850 MICU1Q9BPX6 476 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 RTL8AQ9BWD3 113 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 DEFB127Q9H1M4 99 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 PRSS50Q9UI38 385 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.77
NUP54-202ENST00000502850 LIPGQ9Y5X9 500 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 ATP23Q9Y6H3 246 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 ACACAQ13085 2346 aa10.27□□□□□ -0.77
NUP54-202ENST00000502850 URB1O60287 2271 aaKnown RBP10.26□□□□□ -0.77
NUP54-202ENST00000502850 C3orf85A0A1B0GTC6 90 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 FAM221AA4D161 298 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 ZNF503-AS2A6NEH8 195 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 ZNF705EA8MWA4 302 aaPredicted RBP10.26□□□□□ -0.77
NUP54-202ENST00000502850 J3QT63 122 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 GPR31O00270 319 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 ST8SIA3O43173 380 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 PHF1O43189 567 aaPredicted RBP10.26□□□□□ -0.77
NUP54-202ENST00000502850 GPR137BO60478 399 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 IL18BPO95998 194 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 APOC3P02656 99 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 CCL2P13500 99 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 SELEP16581 610 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 P2RY1P47900 373 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 TNFSF10P50591 281 aa10.26□□□□□ -0.77
NUP54-202ENST00000502850 FOXG1P55316 489 aaPredicted RBP10.26□□□□□ -0.77
NUP54-202ENST00000502850 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms