RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ATP1B3P54709 279 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
TRAF4-212ENST00000498540 C17orf58Q2M2W7 97 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 CASC10Q5T4H9 136 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 AADACL4Q5VUY2 407 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 THNSL2Q86YJ6 484 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 DRAM1Q8N682 238 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 DNAAF1Q8NEP3 725 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 RPEQ96AT9 228 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 RYR2Q92736 4967 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 FUOMA2VDF0 154 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 LINC01548A6NM66 108 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 CYB5AP00167 134 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 SERPINA3P01011 423 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 TMEM11P17152 192 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 ECI1P42126 302 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 MTCP1P56278 107 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 SLC35B1P78383 322 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 DIAPH2-AS1Q14236 149 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 HES1Q14469 280 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 HNF4GQ14541 408 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 ATXN7L3Q14CW9 347 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-212ENST00000498540 KLHL22Q53GT1 634 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 NXNL2Q5VZ03 156 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 LCNL1Q6ZST4 164 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 SLC35E3Q7Z769 313 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 RDH10Q8IZV5 341 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 PRSS35Q8N3Z0 413 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 STPG2Q8N412 459 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 COMMD1Q8N668 190 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 TCEANCQ8N8B7 351 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 OR9G1Q8NH87 305 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 LEAP2Q969E1 77 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 RFT1Q96AA3 541 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 ADAT3Q96EY9 351 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-212ENST00000498540 KIRREL1Q96J84 757 aa11.56□□□□□ -0.56
TRAF4-212ENST00000498540 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
TRAF4-212ENST00000498540 DNAH7Q8WXX0 4024 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 A0A1W2PQL4 384 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-212ENST00000498540 ZNF729A6NN14 1252 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-212ENST00000498540 FGF16O43320 207 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 APOL3O95236 402 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 IGHG2P01859 326 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 RPLP1P05386 114 aaKnown RBP11.55□□□□□ -0.56
TRAF4-212ENST00000498540 CSN2P05814 226 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 ZNF44P15621 663 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 KIR3DL2P43630 455 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 GP2P55259 537 aaKnown RBP11.55□□□□□ -0.56
TRAF4-212ENST00000498540 EFNB1P98172 346 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 SCN1BQ07699 218 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 PDZK1IP1Q13113 114 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 KRBOX4Q5JUW0 171 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 CCDC54Q8NEL0 328 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 TMEM163Q8TC26 289 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 PP6455Q8WZ26 134 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 C10orf35Q96D05 121 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 ADI1Q9BV57 179 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 COMMD4Q9H0A8 199 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 DCLRE1BQ9H816 532 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 PCDHB16Q9NRJ7 776 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 GAR1Q9NY12 217 aaKnown RBP11.55□□□□□ -0.56
TRAF4-212ENST00000498540 H2AFY2Q9P0M6 372 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-212ENST00000498540 SCOCQ9UIL1 159 aa11.55□□□□□ -0.56
TRAF4-212ENST00000498540 METTL15A6NJ78 407 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 AQP12BA6NM10 295 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 J3QR06 171 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 SLC33A1O00400 549 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-212ENST00000498540 IGKV1D-33P01593 117 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 IGKV1-33P01594 117 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 ATF1P18846 271 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 EPHA2P29317 976 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 DAPP51397 102 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 Q6P435 159 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 FAHD1Q6P587 224 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 LHFPL2Q6ZUX7 228 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 FOXRED2Q8IWF2 684 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 AQP12AQ8IXF9 295 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 OR5D18Q8NGL1 313 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 OR5M8Q8NGP6 311 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 DNAJC9Q8WXX5 260 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 NSL1Q96IY1 281 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 SPACA5Q96QH8 159 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 IL4I1Q96RQ9 567 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 PRRG3Q9BZD7 231 aa11.54□□□□□ -0.56
TRAF4-212ENST00000498540 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-212ENST00000498540 KBTBD11-OT1A0A1B0GTJ5 212 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 MITFO75030 526 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-212ENST00000498540 KDM4BO94953 1096 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 UBCP0CG48 685 aaKnown RBP11.53□□□□□ -0.56
TRAF4-212ENST00000498540 CGB3P0DN86 165 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 CGB7P0DN87 165 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 GLP1RP43220 463 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 TEX38Q6PEX7 206 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 GID4Q8IVV7 300 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 RNF166Q96A37 237 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms