RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PDZK1IP1Q13113 114 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 KLRD1Q13241 179 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 FIP1L1Q6UN15 594 aaKnown RBP12.56□□□□□ -0.4
NUP50-219ENST00000497960 LDLRAD3Q86YD5 345 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 Q8IYB0 196 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 ASCC1Q8N9N2 400 aaKnown RBP12.56□□□□□ -0.4
NUP50-219ENST00000497960 TNFRSF14Q92956 283 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 EMG1Q92979 244 aaKnown RBP12.56□□□□□ -0.4
NUP50-219ENST00000497960 S100A13Q99584 98 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 ZNF747Q9BV97 191 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 CHIAQ9BZP6 476 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 PPIL3Q9H2H8 161 aaKnown RBP12.56□□□□□ -0.4
NUP50-219ENST00000497960 DPAGT1Q9H3H5 408 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 GSTK1Q9Y2Q3 226 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 hCG_1809904A0A1W2PP81 198 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PPE2 198 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PR64 198 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PRV1 198 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 MEGF11A6BM72 1044 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 BTBD17A6NE02 478 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 POM121CA8CG34 1229 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 TK1P04183 234 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 BCL3P20749 454 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 IER3P46695 156 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 DLX1P56177 255 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 COL10A1Q03692 680 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 GLT8D1Q68CQ7 371 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 SHISA2Q6UWI4 295 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 OR4M1Q8NGD0 313 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 YIPF6Q96EC8 236 aa12.55□□□□□ -0.4
NUP50-219ENST00000497960 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
NUP50-219ENST00000497960 MEIOCA2RUB1 952 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 F8VVB4 439 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 F8VWA3 439 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 K7N7A8 449 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 PRKACAP17612 351 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 OMGP23515 440 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
NUP50-219ENST00000497960 SNU13P55769 128 aaKnown RBP12.54□□□□□ -0.4
NUP50-219ENST00000497960 RPL15P61313 204 aaKnown RBP12.54□□□□□ -0.4
NUP50-219ENST00000497960 TMEM200BQ69YZ2 307 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 AWAT2Q6E213 333 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 GPR141Q7Z602 305 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 SAXO1Q8IYX7 474 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 ZSCAN4Q8NAM6 433 aaPredicted RBP12.54□□□□□ -0.4
NUP50-219ENST00000497960 OR13F1Q8NGS4 319 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 OR4F5Q8NH21 305 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 SGMS2Q8NHU3 365 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 DYRK2Q92630 601 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 HEXA-AS1Q9H8Q6 139 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 RBFOX1Q9NWB1 397 aaKnown RBP12.54□□□□□ -0.4
NUP50-219ENST00000497960 GLS2Q9UI32 602 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 SCOCQ9UIL1 159 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 MRPS28Q9Y2Q9 187 aaKnown RBP12.54□□□□□ -0.4
NUP50-219ENST00000497960 TENM1Q9UKZ4 2725 aa12.54□□□□□ -0.4
NUP50-219ENST00000497960 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 A0A1B0GUS0 222 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 PDCD5O14737 125 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 AIREO43918 545 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 KDM4BO94953 1096 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 SAA4P35542 130 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 PTGFRP43088 359 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 NPBWR2P48146 333 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 RAG2P55895 527 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 RSU1Q15404 277 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 GDPD3Q7L5L3 318 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 CDH26Q8IXH8 852 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 FAM58AQ8N1B3 248 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 PNKDQ8N490 385 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 PXT1Q8NFP0 134 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUP50-219ENST00000497960 FOXRED1Q96CU9 486 aaPredicted RBP12.53□□□□□ -0.4
NUP50-219ENST00000497960 SNX22Q96L94 193 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 KCTD7Q96MP8 289 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 PLGRKTQ9HBL7 147 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
NUP50-219ENST00000497960 NBEAL1Q6ZS30 2694 aa12.53□□□□□ -0.4
NUP50-219ENST00000497960 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 GPR137BO60478 399 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 CDRT1O95170 752 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 HAND1O96004 215 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 TFAP2AP05549 437 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 SERPINA2P20848 420 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 MDKP21741 143 aaPredicted RBP12.52□□□□□ -0.41
NUP50-219ENST00000497960 ALDH3B2P48448 385 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 EDDM3BP56851 147 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 MIDNQ504T8 468 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 CENPOQ9BU64 300 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.41
NUP50-219ENST00000497960 SEBOXQ9HB31 216 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms