RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 PTGFRP43088 359 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 EFNB2P52799 333 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 KRTAP10-3P60369 221 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
HDAC4-213ENST00000496347 DYNC1I2Q13409 638 aaKnown RBP12.71□□□□□ -0.37
HDAC4-213ENST00000496347 IL13RA2Q14627 380 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 SSX2Q16385 188 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 OR2G6Q5TZ20 316 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 OR52W1Q6IF63 320 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 Q6P435 159 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 HEPN1Q6WQI6 88 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 RNF144BQ7Z419 303 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 DHRSXQ8N5I4 330 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 OR51A2Q8NGJ7 313 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 OR2T6Q8NHC8 308 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 TNFAIP8L1Q8WVP5 186 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 CORO2AQ92828 525 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 GPER1Q99527 375 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 FAM192AQ9GZU8 254 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 TMEM138Q9NPI0 162 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 TAS2R4Q9NYW5 299 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 A0A0G2JK05 382 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 F2RL2O00254 374 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 CASQ2O14958 399 aaPredicted RBP12.7□□□□□ -0.38
HDAC4-213ENST00000496347 PAX6P26367 422 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 CAPGP40121 348 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 KIR2DS4P43632 304 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 SOX2P48431 317 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 PAX5Q02548 391 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 KRBOX4Q5JUW0 171 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 LDLRAD2Q5SZI1 272 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 RTN4RL2Q86UN3 420 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 DYNAPQ8N1N2 210 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 OR51T1Q8NGJ9 327 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 COQ2Q96H96 371 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 TMEM80Q96HE8 168 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 VCXQ9H320 206 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
HDAC4-213ENST00000496347 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
HDAC4-213ENST00000496347 OR6C3Q9NZP0 311 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF281Q9Y2X9 895 aa12.7□□□□□ -0.38
HDAC4-213ENST00000496347 EFCAB10A6NFE3 127 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 H0YJX3 145 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 DEGS1O15121 323 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 OGG1O15527 345 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 ALDOBP05062 364 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 CD34P28906 385 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 GLIPR1P48060 266 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 KCNJ3P48549 501 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 TAS2R43P59537 309 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 AESQ08117 197 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-213ENST00000496347 RSU1Q15404 277 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 PLA1AQ53H76 456 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-213ENST00000496347 PRAMEF5Q5TYX0 476 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 C8orf59Q8N0T1 100 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-213ENST00000496347 Q8NFD4 153 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 OR4P4Q8NGL7 312 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 NDNFQ8TB73 568 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 NCOR1P1Q9H4R4 102 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 IL36GQ9NZH8 169 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 CKLFQ9UBR5 152 aa12.69□□□□□ -0.38
HDAC4-213ENST00000496347 A0A087X0M5 115 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 TRBV5-5A0A0J9YX44 114 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 A0A1B0GX30 115 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 A6NDX4 124 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-213ENST00000496347 FSTP19883 344 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 CDK2P24941 298 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 HTR1DP28221 377 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 BDH1Q02338 343 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 SCN1BQ07699 218 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 RIPK1Q13546 671 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 PAN3Q58A45 887 aaKnown RBP12.68□□□□□ -0.38
HDAC4-213ENST00000496347 NHLRC3Q5JS37 347 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 DDI2Q5TDH0 399 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 DMKNQ6E0U4 476 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-213ENST00000496347 ASCL4Q6XD76 172 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 Q6ZTK2 550 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 LINC00596Q86U02 117 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 SATL1Q86VE3 508 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 Q8N2B8 174 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 ZNF485Q8NCK3 441 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 FBLIM1Q8WUP2 373 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 CREB3L1Q96BA8 519 aa12.68□□□□□ -0.38
HDAC4-213ENST00000496347 PAK1IP1Q9NWT1 392 aaPredicted RBP12.68□□□□□ -0.38
HDAC4-213ENST00000496347 TRAV24A0A0B4J272 114 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 MMP23AO75900 390 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 LALBAP00709 142 aa12.67□□□□□ -0.38
HDAC4-213ENST00000496347 GNAO1P09471 354 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms