RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SSR3Q9UNL2 185 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 NF1P21359 2839 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 LOC100506127A0A0U1RQW1 187 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 SMIM30A4D0T7 59 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 MGMTP16455 207 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 CCL3L1P16619 93 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 JUNBP17275 347 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-212ENST00000495497 MYL9P24844 172 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 FGF9P31371 208 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-212ENST00000495497 CLDN12P56749 244 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 ERVFRD-1P60508 538 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 AESQ08117 197 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 GPR176Q14439 515 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 ATXN7L3Q14CW9 347 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-212ENST00000495497 NHLRC3Q5JS37 347 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 HES5Q5TA89 166 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 BRICD5Q6PL45 260 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 VMO1Q7Z5L0 202 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 PDZD9Q8IXQ8 264 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 CHST4Q8NCG5 386 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 OR6M1Q8NGM8 313 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 SIRT7Q9NRC8 400 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 PCDHB16Q9NRJ7 776 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 V9GY05 133 aa15.98■□□□□ 0.15
HDAC4-212ENST00000495497 SETD2Q9BYW2 2564 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-212ENST00000495497 TRAV40A0A0B4J280 105 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 SLC17A2O00624 439 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 PDCD5O14737 125 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 MGST3O14880 152 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 OR7C1O76099 320 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-212ENST00000495497 MPIG6BO95866 241 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 VSIG8P0DPA2 414 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 PAN3Q58A45 887 aaKnown RBP15.97■□□□□ 0.15
HDAC4-212ENST00000495497 PPP1R35Q8TAP8 253 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 C22orf15Q8WYQ4 148 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 YIPF6Q96EC8 236 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 POM121Q96HA1 1249 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 CYYR1Q96J86 154 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 GHRLQ9UBU3 117 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 SOX21Q9Y651 276 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-212ENST00000495497 KPTNQ9Y664 436 aa15.97■□□□□ 0.15
HDAC4-212ENST00000495497 UBBP0CG47 229 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 RAB3BP20337 219 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 GLIPR1P48060 266 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 RAB11BQ15907 218 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 ATAD3CQ5T2N8 411 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 TCF23Q7RTU1 214 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 NR2C2APQ86WQ0 139 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 PRIMA1Q86XR5 153 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 CMTM4Q8IZR5 234 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 TEX29Q8N6K0 151 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 KIR3DL3Q8N743 410 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 SUMF2Q8NBJ7 301 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 LHX4Q969G2 390 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 COQ2Q96H96 371 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 CENPOQ9BU64 300 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 NUP50Q9UKX7 468 aa15.96■□□□□ 0.15
HDAC4-212ENST00000495497 EPHA1P21709 976 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 TGFBR1P36897 503 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 P2RX3P56373 397 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 QRFPP83859 136 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 KLRD1Q13241 179 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 UNC119Q13432 240 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 LINC00596Q86U02 117 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 BCL6BQ8N143 479 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-212ENST00000495497 OR51D1Q8NGF3 324 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 PLPPR1Q8TBJ4 325 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 Q96M66 194 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 DMRTB1Q96MA1 342 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 DPCDQ9BVM2 203 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-212ENST00000495497 CST11Q9H112 138 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 ZNF69Q9UC07 566 aa15.95■□□□□ 0.14
HDAC4-212ENST00000495497 CENPVL3A0A0U1RRI6 287 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 TMEM14DPA8MWL7 114 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 M0R1W7 72 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 BPNT1O95861 308 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 CLEC2LP0C7M8 214 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 ARSBP15848 533 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 DLX6P56179 175 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 RIPPLY3P57055 190 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 PLA2G7Q13093 441 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 MPV17LQ2QL34 196 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 KRBOX4Q5JUW0 171 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 RUSC1-AS1Q66K80 236 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 BRD3OSQ6XYD6 125 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 C11orf42Q8N5U0 333 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 MRPS24Q96EL2 167 aaKnown RBP15.94■□□□□ 0.14
HDAC4-212ENST00000495497 KCTD7Q96MP8 289 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 IFT22Q9H7X7 185 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 STEAP1Q9UHE8 339 aa15.94■□□□□ 0.14
HDAC4-212ENST00000495497 A0A0B4J203 849 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 A0A1W2PRD5 423 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 A0A1W2PRF3 423 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 A0A1W2PRM7 423 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 hADV38S2A0JD32 116 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 CSN2P05814 226 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 SLC2A2P11168 524 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-212ENST00000495497 ERP29P30040 261 aaKnown RBP15.93■□□□□ 0.14
HDAC4-212ENST00000495497 SDC2P34741 201 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 PSMD7P51665 324 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms