RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 RPL7L1Q6DKI1 246 aaKnown RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 FBXW12Q6X9E4 464 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 CMTM1Q8IZ96 169 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 NAXEQ8NCW5 288 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 OR5P3Q8WZ94 311 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 HES7Q9BYE0 225 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 KMT2EQ8IZD2 1858 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 PCSK5Q92824 1860 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 WDR87Q6ZQQ6 2873 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 TRGV5A0A0B4J1U4 118 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 A0A1W2PNU3 283 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 SLC22A20A6NK97 555 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 SCGB1D2O95969 90 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 MBPP02686 304 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 PRSS12P56730 875 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 ZNF169Q14929 603 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 PHLDA2Q53GA4 152 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 HES3Q5TGS1 186 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 C9orf135Q5VTT2 229 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 NUFIP2Q7Z417 695 aaKnown RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 LDLRAD3Q86YD5 345 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 Q8IYB0 196 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 BHLHE23Q8NDY6 225 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 OR1K1Q8NGR3 316 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 NEK7Q8TDX7 302 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 HPSE2Q8WWQ2 592 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 IL22RA2Q969J5 263 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 SLAMF9Q96A28 289 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 MARS2Q96GW9 593 aaKnown RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 TMEM56Q96MV1 263 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 TMEM222Q9H0R3 208 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 ARV1Q9H2C2 271 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 IFT22Q9H7X7 185 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 COQ3Q9NZJ6 369 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 FBXL17Q9UF56 701 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 UBE2J1Q9Y385 318 aaPredicted RBP8.29□□□□□ -1.08
NPHP3-209ENST00000493732 TMEM56-RWDD3S4R434 201 aa8.29□□□□□ -1.08
NPHP3-209ENST00000493732 FAM221AA4D161 298 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 F8W036 122 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 ABCD4O14678 606 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 MED6O75586 246 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 MDH2P40926 338 aaKnown RBP8.28□□□□□ -1.08
NPHP3-209ENST00000493732 ARG2P78540 354 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 HMGN3Q15651 99 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 TBC1D28Q2M2D7 210 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 SP6Q3SY56 376 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 DHRS13Q6UX07 377 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 LYZL2Q7Z4W2 148 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 ZNF695Q8IW36 515 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 BCL2L2Q92843 193 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-209ENST00000493732 GMPPAQ96IJ6 420 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-209ENST00000493732 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 TREM1Q9NP99 234 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 UQCC1Q9NVA1 299 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 MTCH1Q9NZJ7 389 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 IL17BQ9UHF5 180 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 AMDHD2Q9Y303 409 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 TNRC6AQ8NDV7 1962 aaKnown RBP8.28□□□□□ -1.08
NPHP3-209ENST00000493732 RTTNQ86VV8 2226 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 ZDBF2Q9HCK1 2354 aa8.28□□□□□ -1.08
NPHP3-209ENST00000493732 TUSC2O75896 110 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 HOXB1P14653 301 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 MMP9P14780 707 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 ZNF766Q5HY98 468 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 OR2A2Q6IF42 318 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 FAM122CQ6P4D5 195 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 MOB1BQ7L9L4 216 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 OR4A4PQ8NGN8 299 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 DYRK2Q92630 601 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 WDYHV1Q96HA8 205 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 MS4A7Q9GZW8 240 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 SLC25A31Q9H0C2 315 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 TREM2Q9NZC2 230 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 ZNF581Q9P0T4 197 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 LUZP4Q9P127 313 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 POLDIP2Q9Y2S7 368 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 STRAPQ9Y3F4 350 aaKnown RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 CLEC18AA5D8T8 446 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 J3QT63 122 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 DNASE2O00115 360 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 CNOT4O95628 575 aaKnown RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 SELEP16581 610 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 PRKACAP17612 351 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 GNRHRP30968 328 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 KCNJ3P48549 501 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 ZNF266Q14584 549 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 MST1LQ2TV78 715 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 IGSF11Q5DX21 431 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 SPIN3Q5JUX0 258 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 HAGHLQ6PII5 290 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 P4HA3Q7Z4N8 544 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-209ENST00000493732 FAM58AQ8N1B3 248 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 CLEC18CQ8NCF0 446 aa8.27□□□□□ -1.09
NPHP3-209ENST00000493732 CLRN3Q8NCR9 226 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms