RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CNPY1Q3B7I2 92 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 Q6P435 159 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 BAIAP2L2Q6UXY1 529 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 DCHS2Q6V1P9 2916 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 LINC00299Q6ZSB3 139 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 BATF2Q8N1L9 274 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 CD177Q8N6Q3 437 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 OR5T2Q8NGG2 359 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 OR5H6Q8NGV6 325 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 OR10R2Q8NGX6 335 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 SEH1LQ96EE3 360 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 GAFA1Q96PS6 74 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 CCL13Q99616 98 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 C6orf62Q9GZU0 229 aaPredicted RBP10.37□□□□□ -0.75
SNX17-208ENST00000493711 PLEKHJ1Q9NW61 149 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 RCC2Q9P258 522 aaKnown RBP10.37□□□□□ -0.75
SNX17-208ENST00000493711 IL36RNQ9UBH0 155 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 SPG11Q96JI7 2443 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 IGHV4-30-2A0A087WSY4 118 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 SERPINE3A8MV23 424 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 FAM25AB3EWG3 89 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 FAM25CB3EWG5 89 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 FAM25GB3EWG6 89 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 F5H0A9 414 aaPredicted RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 K7N7A8 449 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 SIRPB1O00241 398 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 MGST3O14880 152 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 CLPXO76031 633 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 ECDO95905 644 aaPredicted RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 CSN2P05814 226 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 WNT2P09544 360 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 DUSP1P28562 367 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 VEGFCP49767 419 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 PAX5Q02548 391 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 LOXL1Q08397 574 aaPredicted RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 ESCO2Q56NI9 601 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 PAN3Q58A45 887 aaKnown RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 ATAD3CQ5T2N8 411 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 CD276Q5ZPR3 534 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 Q6ZTK2 550 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 CMTM4Q8IZR5 234 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 OR8H2Q8N162 312 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 ASCC1Q8N9N2 400 aaKnown RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 C19orf18Q8NEA5 215 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 SLC25A38Q96DW6 304 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 DPCDQ9BVM2 203 aaPredicted RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
SNX17-208ENST00000493711 KCNK15Q9H427 330 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 NCOR1P1Q9H4R4 102 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 DSCAMO60469 2012 aa10.36□□□□□ -0.75
SNX17-208ENST00000493711 RAB27BO00194 218 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 SLC33A1O00400 549 aaPredicted RBP10.35□□□□□ -0.75
SNX17-208ENST00000493711 XRCC3O43542 346 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 HPGDSO60760 199 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 ZNF737O75373 536 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 IGHV2-5P01817 119 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 TK1P04183 234 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 GSTP1P09211 210 aaKnown RBP10.35□□□□□ -0.75
SNX17-208ENST00000493711 CHATP28329 748 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 ERP29P30040 261 aaKnown RBP10.35□□□□□ -0.75
SNX17-208ENST00000493711 MRPS15P82914 257 aaKnown RBP10.35□□□□□ -0.75
SNX17-208ENST00000493711 GDPD3Q7L5L3 318 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 SUMF2Q8NBJ7 301 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 TMEM185AQ8NFB2 350 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 CLDND2Q8NHS1 167 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 DMRTB1Q96MA1 342 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 WDFY2Q96P53 400 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 NICN1Q9BSH3 213 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 REG4Q9BYZ8 158 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
SNX17-208ENST00000493711 SLC25A10Q9UBX3 287 aaPredicted RBP10.35□□□□□ -0.75
SNX17-208ENST00000493711 CLN8Q9UBY8 286 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 MAB21L2Q9Y586 359 aa10.35□□□□□ -0.75
SNX17-208ENST00000493711 TACC2O95359 2948 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 TRBV23-1A0A0A0MS06 115 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 TRAV24A0A0B4J272 114 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 FOXI3A8MTJ6 420 aaPredicted RBP10.34□□□□□ -0.75
SNX17-208ENST00000493711 CTDSP2O14595 271 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 DVL1O14640 695 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 SOCS1O15524 211 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 HIST1H1DP16402 221 aaKnown RBP10.34□□□□□ -0.75
SNX17-208ENST00000493711 ELK1P19419 428 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 AMY2BP19961 511 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 MNDAP41218 407 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 LMO4P61968 165 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 HOXA4Q00056 320 aaPredicted RBP10.34□□□□□ -0.75
SNX17-208ENST00000493711 PITPNAQ00169 270 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 GRK1Q15835 563 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 PNLIPRP3Q17RR3 467 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 NKAPLQ5M9Q1 402 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 TMEM69Q5SWH9 247 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 SIGIRRQ6IA17 410 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 METAP1DQ6UB28 335 aaPredicted RBP10.34□□□□□ -0.75
SNX17-208ENST00000493711 LYPD2Q6UXB3 125 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 FAM216BQ8N7L0 139 aa10.34□□□□□ -0.75
SNX17-208ENST00000493711 Q96MF0 132 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms