RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PLEKHA1Q9HB21 404 aa1.92□□□□□ -2.1
CLK1-213ENST00000492793 IFT46Q9NQC8 304 aa1.92□□□□□ -2.1
CLK1-213ENST00000492793 AGPAT3Q9NRZ7 376 aa1.92□□□□□ -2.1
CLK1-213ENST00000492793 CLEC2DQ9UHP7 191 aa1.92□□□□□ -2.1
CLK1-213ENST00000492793 ZBED9Q6R2W3 1325 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 YLPM1P49750 1951 aaKnown RBP1.91□□□□□ -2.1
CLK1-213ENST00000492793 TRAV8-3A0A0A6YYJ7 113 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 PGPA6NDG6 321 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 ZMPSTE24O75844 475 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 IGKV1D-33P01593 117 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 IGKV1-33P01594 117 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 IGHV3-53P01767 116 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 ZNF708P17019 499 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 RPA3P35244 121 aaPredicted RBP1.91□□□□□ -2.1
CLK1-213ENST00000492793 CBX5P45973 191 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 LGALS7P47929 136 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 FOXA1P55317 472 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 TSPAN5P62079 268 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 TRAM1Q15629 374 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 C18orf21Q32NC0 220 aaPredicted RBP1.91□□□□□ -2.1
CLK1-213ENST00000492793 KRTAP25-1Q3LHN0 102 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 TPGS1Q6ZTW0 290 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 FAM19A1Q7Z5A9 133 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 SLC25A44Q96H78 314 aaPredicted RBP1.91□□□□□ -2.1
CLK1-213ENST00000492793 PKMYT1Q99640 499 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 PITX2Q99697 317 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 GOLPH3Q9H4A6 298 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 NAGKQ9UJ70 344 aa1.91□□□□□ -2.1
CLK1-213ENST00000492793 DOCK6Q96HP0 2047 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 IGHV3-43A0A0B4J1X8 118 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 LOC100506127A0A0U1RQW1 187 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 A8MWP4 228 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 GGTLC3B5MD39 225 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 E7EQL1 145 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 I3L4J1 428 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 FFAR1O14842 300 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 UBDO15205 165 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 CPSF4O95639 269 aaKnown RBP1.9□□□□□ -2.11
CLK1-213ENST00000492793 APOA1P02647 267 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 PSMB9P28065 219 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 ELK4P28324 431 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 TGFBR2P37173 567 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 GCLMP48507 274 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 HBG1P69891 147 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 HBG2P69892 147 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 BCL2A1Q16548 175 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 GOLGA7BQ2TAP0 167 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 Q3ZCU0 254 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 ZNF470Q6ECI4 717 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 Q6ZQT7 251 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 GATD1Q8NB37 220 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 ZNF738Q8NE65 137 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 BPIFB6Q8NFQ5 453 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 OR2AE1Q8NHA4 323 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 MUC7Q8TAX7 377 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 NXT1Q9UKK6 140 aaKnown RBP1.9□□□□□ -2.11
CLK1-213ENST00000492793 BTRCQ9Y297 605 aa1.9□□□□□ -2.11
CLK1-213ENST00000492793 NACADO15069 1562 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 ZNF638Q14966 1978 aaKnown RBP1.89□□□□□ -2.11
CLK1-213ENST00000492793 A0A1B0GXF2 115 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 A0A1W2PRG6 482 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 SLC2A1P11166 492 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 ETV1P50549 477 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 CEACAM21Q3KPI0 293 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 AADACL4Q5VUY2 407 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 GLYATQ6IB77 296 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 HCP5Q6MZN7 132 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 AHSA2Q719I0 299 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 SPICQ8N5J4 248 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 LY6G5BQ8NDX9 201 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 OR2M3Q8NG83 312 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 OR5P3Q8WZ94 311 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 CCDC124Q96CT7 223 aaKnown RBP1.89□□□□□ -2.11
CLK1-213ENST00000492793 OLFM3Q96PB7 478 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 TAPBPLQ9BX59 468 aa1.89□□□□□ -2.11
CLK1-213ENST00000492793 LTBP4Q8N2S1 1624 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 MYBPHLA2RUH7 354 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 H3BMM0 161 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 BOLA2-SMG1P6H3BVE0 249 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 POP7O75817 140 aaKnown RBP1.88□□□□□ -2.11
CLK1-213ENST00000492793 LDOC1O95751 146 aaPredicted RBP1.88□□□□□ -2.11
CLK1-213ENST00000492793 HLA-AP01891 365 aaKnown RBP1.88□□□□□ -2.11
CLK1-213ENST00000492793 GUSBP08236 651 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 CCL2P13500 99 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 SPNP16150 400 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 LCN1P31025 176 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 PYCR1P32322 319 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 MAGEA3P43357 314 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 PRDX1Q06830 199 aaKnown RBP1.88□□□□□ -2.11
CLK1-213ENST00000492793 TPBGQ13641 420 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 TMEM215Q68D42 235 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 ELP2Q6IA86 826 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 LAIR2Q6ISS4 152 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 WDR59Q6PJI9 974 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 OLIG3Q7RTU3 272 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 MARCH3Q86UD3 253 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 COMTD1Q86VU5 262 aa1.88□□□□□ -2.11
CLK1-213ENST00000492793 LRRC6Q86X45 466 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms