RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 P2RX3P56373 397 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 ERVK11-1P61568 191 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 BEST4Q8NFU0 473 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 CMSS1Q9BQ75 279 aaKnown RBP10.77□□□□□ -0.69
NELFE-209ENST00000488426 NRIP2Q9BQI9 281 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 IFT22Q9H7X7 185 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 ZNF581Q9P0T4 197 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 DUSP13Q9UII6 198 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 DPRXA6NFQ7 191 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 IFNA6P05013 189 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 GLAP06280 429 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 GRPP07492 148 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 CD200P41217 278 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 SNU13P55769 128 aaKnown RBP10.76□□□□□ -0.69
NELFE-209ENST00000488426 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ARRDC1Q8N5I2 433 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 POC1AQ8NBT0 407 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 WFIKKN1Q96NZ8 548 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 SLC6A7Q99884 636 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 GHITMQ9H3K2 345 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ZNF442Q9H7R0 627 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 MSL2Q9HCI7 577 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 C12orf4Q9NQ89 552 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ZNF701Q9NV72 531 aaPredicted RBP10.76□□□□□ -0.69
NELFE-209ENST00000488426 FLVCR2Q9UPI3 526 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 A0A0A6YYJ9 748 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 PLSCR5A0PG75 271 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 F5H5P2 479 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ABCD4O14678 606 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 CDIPTO14735 213 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 PTBP3O95758 552 aaKnown RBP10.76□□□□□ -0.69
NELFE-209ENST00000488426 IL5P05113 134 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
NELFE-209ENST00000488426 BSPH1Q075Z2 132 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 MAB21L1Q13394 359 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 IKZF1Q13422 519 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 MICBQ29980 383 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ATAD3CQ5T2N8 411 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 METTL11BQ5VVY1 283 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 LRP11Q86VZ4 500 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 OR5H2Q8NGV7 314 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 MRPL24Q96A35 216 aaKnown RBP10.76□□□□□ -0.69
NELFE-209ENST00000488426 CYYR1Q96J86 154 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ZNF488Q96MN9 340 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ST6GALNAC5Q9BVH7 336 aa10.76□□□□□ -0.69
NELFE-209ENST00000488426 ITPR3Q14573 2671 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 CCNKO75909 580 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 FCGR3AP08637 254 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 CTRB1P17538 263 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 SORDQ00796 357 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 NKPD1Q17RQ9 610 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 CTRB2Q6GPI1 263 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 FIP1L1Q6UN15 594 aaKnown RBP10.75□□□□□ -0.69
NELFE-209ENST00000488426 OR2Z1Q8NG97 314 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 OR5AP2Q8NGF4 316 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 SYT3Q9BQG1 590 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 ESRP2Q9H6T0 727 aaKnown RBP10.75□□□□□ -0.69
NELFE-209ENST00000488426 HES4Q9HCC6 221 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 CA10Q9NS85 328 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 IL36RNQ9UBH0 155 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 ZMAT5Q9UDW3 170 aaKnown RBP10.75□□□□□ -0.69
NELFE-209ENST00000488426 NDRG3Q9UGV2 375 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 ROS1P08922 2347 aa10.75□□□□□ -0.69
NELFE-209ENST00000488426 UBE2QL1A1L167 161 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 FAM221AA4D161 298 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 ZSCAN5BA6NJL1 495 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 MCRIP1C9JLW8 97 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 NXPH2O95156 264 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 PMP2P02689 132 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 CSN2P05814 226 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 OR3A3P47888 321 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 PDCD1Q15116 288 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 SCGB2B2Q4G0G5 96 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 SPIN3Q5JUX0 258 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 SLC22A25Q6T423 547 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 TMEM17Q86X19 198 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 C11orf53Q8IXP5 236 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 OR13C8Q8NGS7 320 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 OR6F1Q8NGZ6 308 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 CAPSLQ8WWF8 208 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 GTF3AQ92664 365 aaKnown RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 HDHD3Q9BSH5 251 aaPredicted RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 MRPL37Q9BZE1 423 aaKnown RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 ALX4Q9H161 411 aaPredicted RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 OR51J1Q9H342 316 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 GPN1Q9HCN4 374 aaPredicted RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 MYOZ1Q9NP98 299 aaPredicted RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 TAAR3PQ9P1P4 343 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 ZNF230Q9UIE0 474 aaPredicted RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 MTORP42345 2549 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 MED13LQ71F56 2210 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 A6NLC8 198 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 RLN1P04808 185 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 RBM39Q14498 530 aaKnown RBP10.74□□□□□ -0.69
NELFE-209ENST00000488426 ZNF146Q15072 292 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 TESK1Q15569 626 aa10.74□□□□□ -0.69
NELFE-209ENST00000488426 SRSF7Q16629 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms