RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 EBF4Q9BQW3 602 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 C1orf50Q9BV19 199 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 CCDC32Q9BV29 185 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 SLC25A39Q9BZJ4 359 aaPredicted RBP2.34□□□□□ -2.03
RBM28-207ENST00000488249 COA1Q9GZY4 146 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 VSIRQ9H7M9 311 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 COMMD9Q9P000 198 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 DOK5Q9P104 306 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 OR12D3Q9UGF7 316 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 PSG8Q9UQ74 426 aa2.34□□□□□ -2.03
RBM28-207ENST00000488249 ZNF256Q9Y2P7 627 aaPredicted RBP2.34□□□□□ -2.03
RBM28-207ENST00000488249 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.34□□□□□ -2.03
RBM28-207ENST00000488249 CHD5Q8TDI0 1954 aa2.34□□□□□ -2.04
RBM28-207ENST00000488249 PALLDQ8WX93 1383 aa2.34□□□□□ -2.04
RBM28-207ENST00000488249 ATRXP46100 2492 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RB1CC1Q8TDY2 1594 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 TRAV9-2A0A087WT02 112 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 TRABD2BA6NFA1 517 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 OR4C46A6NHA9 309 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 LOC110117498-PIK3R3F6TDL0 507 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 F6UB75 175 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 SLC17A3O00476 420 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 CYB5BO43169 146 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 MFSD11O43934 449 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 STK16O75716 305 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 SLC2A10O95528 541 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 HPRT1P00492 218 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 IGF2P01344 180 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 IGKV1D-16P01601 117 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 IFNA4P05014 189 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 S100A8P05109 93 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 REG1AP05451 166 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 FCGR3AP08637 254 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PGA4P0DJD7 388 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PGA3P0DJD8 388 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PGA5P0DJD9 388 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 IFI30P13284 250 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 NELFEP18615 380 aaKnown RBP2.33□□□□□ -2.04
RBM28-207ENST00000488249 KLK2P20151 261 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 LGALS7P47929 136 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PSMD8P48556 350 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 SERPINB10P48595 397 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 GZMMP51124 257 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 GPM6AP51674 278 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 APOC4P55056 127 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RIPPLY3P57055 190 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 TAS2R43P59537 309 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 TPI1P60174 286 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RND3P61587 244 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 HIST1H3AP68431 136 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 H3F3AP84243 136 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RELAQ04206 551 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PUDPQ08623 228 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 OR7A5Q15622 319 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 NSDHLQ15738 373 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 MICAQ29983 383 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 CLEC12BQ2HXU8 276 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 TIMM50Q3ZCQ8 353 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PRR30Q53SZ7 412 aaPredicted RBP2.33□□□□□ -2.04
RBM28-207ENST00000488249 TMEM78Q5T7P6 136 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 KCTD16Q68DU8 428 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 ZNF57Q68EA5 555 aaPredicted RBP2.33□□□□□ -2.04
RBM28-207ENST00000488249 PAMR1Q6UXH9 720 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 APOOLQ6UXV4 268 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 HIST2H3AQ71DI3 136 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PEX26Q7Z412 305 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RAB43Q86YS6 212 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 UBALD2Q8IYN6 164 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RDH10Q8IZV5 341 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 SVOPLQ8N434 492 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PNKDQ8N490 385 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 ZNF491Q8N8L2 437 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 ZNF439Q8NDP4 499 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 OR51G1Q8NGK1 321 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 OR4P4Q8NGL7 312 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 OR51Q1Q8NH59 317 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 OR51E1Q8TCB6 317 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 C1orf54Q8WWF1 131 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 RGP1Q92546 391 aaPredicted RBP2.33□□□□□ -2.04
RBM28-207ENST00000488249 TMEM203Q969S6 136 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 LRRC58Q96CX6 371 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PAGE5Q96GU1 130 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 C14orf144Q96I85 54 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 LINC00477Q96M19 166 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 MARVELD1Q9BSK0 173 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 MND1Q9BWT6 205 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 ZBP1Q9H171 429 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 FAM96AQ9H5X1 160 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 TMEM9BQ9NQ34 198 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 EHFQ9NZC4 300 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 UBIAD1Q9Y5Z9 338 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 PIK3C2GO75747 1445 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 A2MP01023 1474 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 ARAP1Q96P48 1450 aa2.33□□□□□ -2.04
RBM28-207ENST00000488249 IGKV1D-8A0A087WSZ0 117 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 LOC100131303A0A0U1RQF7 123 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 FAM168BA1KXE4 195 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 FAM92AA1XBS5 289 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 MAP1LC3B2A6NCE7 125 aa2.32□□□□□ -2.04
RBM28-207ENST00000488249 A6NDN8 102 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms